STRINGSTRING
CBG16347 CBG16347 CBG16381 CBG16381 dlg-1 dlg-1 CBG12797 CBG12797 CBG02137 CBG02137 CBG02130 CBG02130 zoo-1 zoo-1 exc-4 exc-4 vha-17 vha-17 hmp-1 hmp-1 par-3 par-3 CBG18580 CBG18580 par-6 par-6 CBG06087 CBG06087
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG16347Protein CBG16347. (191 aa)
CBG16381Protein CBG16381. (516 aa)
dlg-1Protein CBR-DLG-1; Belongs to the MAGUK family. (1015 aa)
CBG12797Protein CBG12797. (315 aa)
CBG02137Protein CBG02137. (97 aa)
CBG02130Protein CBG02130. (188 aa)
zoo-1Protein CBR-ZOO-1. (1208 aa)
exc-4Protein CBR-EXC-4. (291 aa)
vha-17V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (86 aa)
hmp-1Protein CBR-HMP-1. (917 aa)
par-3Protein CBR-PAR-3. (1332 aa)
CBG18580Protein CBG18580. (3100 aa)
par-6Protein CBR-PAR-6. (305 aa)
CBG06087Protein CBG06087. (233 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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