STRINGSTRING
fem-3 fem-3 trf-2 trf-2 CBG01796 CBG01796 CBG01733 CBG01733 CBG01732 CBG01732 tpa-1 tpa-1 svh-1 svh-1 ndk-1 ndk-1 CBG03052 CBG03052 ccm-3 ccm-3 CBG02812 CBG02812 CBG02810 CBG02810 Cbr-max-2 Cbr-max-2 max-2 max-2 vhp-1 vhp-1 stam-1 stam-1 riok-1 riok-1 nekl-4 nekl-4 CBG06087 CBG06087 lip-1 lip-1 rog-1 rog-1 jip-1 jip-1 CBG07104 CBG07104 flr-4 flr-4 tap-1 tap-1 CBG08107 CBG08107 ppm-1.a ppm-1.a unc-16 unc-16 hen-1 hen-1 CBG10838 CBG10838 svh-2 svh-2 lin-44 lin-44 CBG12570 CBG12570 puf-8 puf-8 cst-1 cst-1 pak-1 pak-1 cav-1 cav-1 daf-2 daf-2 sem-5 sem-5 pde-6 pde-6 gck-1 gck-1 kin-18 kin-18 trf-1 trf-1 praf-3 praf-3 paqr-3 paqr-3 oma-2 oma-2 gap-3 gap-3 CBG23363 CBG23363 pak-2 pak-2 mig-15 mig-15
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fem-3Sex-determination protein fem-3; Required for male development. In XO (male) animals, fem-3 directs male differentiation in all tissues. In XX (hermaphrodite animals), it specifies the first 80 or so germ cells to be sperm. Negatively regulates male development when bound to tra-2. (409 aa)
trf-2Protein CBG23748. (294 aa)
CBG01796Protein CBG01796. (564 aa)
CBG01733Protein CBG01733. (299 aa)
CBG01732Protein CBG01732. (549 aa)
tpa-1Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (705 aa)
svh-1Protein CBR-TRY-2; Belongs to the peptidase S1 family. (921 aa)
ndk-1Nucleoside diphosphate kinase. (153 aa)
CBG03052Protein CBG03052. (74 aa)
ccm-3Protein CBG03050. (215 aa)
CBG02812Protein CBG02812. (389 aa)
CBG02810Protein CBG02810. (320 aa)
Cbr-max-2Protein CBR-MAX-2; Belongs to the protein kinase superfamily. (422 aa)
max-2Protein CBG02801. (317 aa)
vhp-1Protein CBR-VHP-1. (672 aa)
stam-1Protein CBR-STAM-1. (471 aa)
riok-1Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (515 aa)
nekl-4Protein CBR-NEKL-4. (1572 aa)
CBG06087Protein CBG06087. (233 aa)
lip-1Protein CBR-LIP-1. (376 aa)
rog-1Protein CBR-ROG-1. (661 aa)
jip-1Protein CBR-JIP-1. (385 aa)
CBG07104Protein CBG07104. (529 aa)
flr-4Protein CBR-FLR-4. (580 aa)
tap-1Protein CBR-TAP-1. (389 aa)
CBG08107Protein CBG08107. (328 aa)
ppm-1.aProtein CBR-PPM-1. (468 aa)
unc-16Protein CBR-UNC-16. (1158 aa)
hen-1Protein CBR-HEN-1. (118 aa)
CBG10838Protein CBG10838. (249 aa)
svh-2Protein CBG10839; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1120 aa)
lin-44Abnormal cell lineage protein 44; Ligand for members of the frizzled family of seven transmembrane receptors (By similarity). Affects male tail development, vulval precursor cell specification and egg laying. Involved in morphogenesis by influencing polarity of asymmetric cell divisions of the B, U, and F cells in the male, and the T cell in males and hermaphrodites. Controls spindle orientation in B-gamma cell division during male copulatory spicule development. Involved in specification of the P7.p lineage during vulval development. Has a role in providing polarity and default lin-17 [...] (341 aa)
CBG12570Protein CBG12570. (1945 aa)
puf-8Protein CBR-PUF-8. (535 aa)
cst-1Serine/threonine-protein kinase cst-1 18kDa subunit; Serine/threonine-protein kinase which extends lifespan and delays tissue aging, probably by activating daf-16. (494 aa)
pak-1Non-specific serine/threonine protein kinase. (626 aa)
cav-1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (239 aa)
daf-2Protein CBR-DAF-2. (1840 aa)
sem-5Protein CBR-SEM-5. (229 aa)
pde-6Phosphodiesterase. (705 aa)
gck-1Protein CBR-GCK-1. (898 aa)
kin-18Protein CBR-KIN-18. (743 aa)
trf-1Protein CBR-TRF-1. (439 aa)
praf-3PRA1 family protein. (189 aa)
paqr-3Protein CBR-PAQR-3. (326 aa)
oma-2Protein CBR-OMA-2. (379 aa)
gap-3Protein CBG22075. (960 aa)
CBG23363Protein CBG23363. (206 aa)
pak-2Non-specific serine/threonine protein kinase. (515 aa)
mig-15Protein CBR-MIG-15, isoform a. (1070 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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