STRINGSTRING
seb-3 seb-3 unc-16 unc-16 dat-1 dat-1 mps-1 mps-1 rhgf-1 rhgf-1 pin-2 pin-2 Cbr-sax-7 Cbr-sax-7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
seb-3Protein CBG07642; Belongs to the G-protein coupled receptor 2 family. (453 aa)
unc-16Protein CBR-UNC-16. (1158 aa)
dat-1Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (622 aa)
mps-1Protein CBR-MPS-1. (308 aa)
rhgf-1Protein CBR-RHGF-1. (1376 aa)
pin-2Protein CBR-PIN-2. (328 aa)
Cbr-sax-7Protein CBR-SAX-7. (1402 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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