STRINGSTRING
atf-7 atf-7 tomm-70 tomm-70 CBG09882 CBG09882 akir-1 akir-1 pqn-37 pqn-37 CBG27393 CBG27393
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
atf-7Protein CBR-ATF-7. (519 aa)
tomm-70Protein CBG06925. (571 aa)
CBG09882Protein CBG09882. (235 aa)
akir-1Protein CBG12062. (217 aa)
pqn-37Protein CBR-PQN-37. (562 aa)
CBG27393Protein CBG27393. (341 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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