STRINGSTRING
sel-7 sel-7 lin-12.1 lin-12.1 lin-12.2 lin-12.2 CBG03616 CBG03616 tir-1 tir-1 CBG03606 CBG03606 CBG03609 CBG03609 CBG06829 CBG06829 CBG04001 CBG04001
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sel-7Protein CBR-SEL-7. (317 aa)
lin-12.1Protein CBG06951. (1359 aa)
lin-12.2Protein CBR-LIN-12. (1392 aa)
CBG03616Protein CBG03616. (379 aa)
tir-1Protein CBR-TIR-1. (585 aa)
CBG03606Protein CBG03606. (414 aa)
CBG03609Protein CBG03609. (174 aa)
CBG06829Protein CBG06829. (987 aa)
CBG04001Protein CBG04001. (213 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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