STRINGSTRING
unc-78 unc-78 myo-3 myo-3 aipl-1 aipl-1 sorb-1 sorb-1 dyb-1 dyb-1 myo-1 myo-1 myo-6 myo-6 unc-54 unc-54 tnt-3 tnt-3 tnt-2 tnt-2 unc-27 unc-27 Cbr-dys-1 Cbr-dys-1 dys-1 dys-1 unc-45 unc-45 nmy-3 nmy-3 stn-1 stn-1 Cbr-myo-2 Cbr-myo-2 unc-94 unc-94 mup-2 mup-2 dyc-1 dyc-1 myo-5 myo-5 unc-89 unc-89 tnt-4 tnt-4 chn-1 chn-1 slo-1 slo-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
unc-78Protein CBR-UNC-78. (611 aa)
myo-3Myosin-3; Essential for muscle contraction. Involved in ovulation likely by regulating the contraction of gonadal myoepithelial sheath cells. (1969 aa)
aipl-1Protein CBR-TAG-216. (599 aa)
sorb-1Protein CBR-SORB-1. (1129 aa)
dyb-1Dystrobrevin. (622 aa)
myo-1Protein CBR-LET-75; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2121 aa)
myo-6Protein CBG21212; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1249 aa)
unc-54Protein CBR-UNC-54; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2004 aa)
tnt-3Protein CBR-TNT-3. (1198 aa)
tnt-2Protein CBR-TNT-2. (426 aa)
unc-27Protein CBR-UNC-27. (238 aa)
Cbr-dys-1Protein CBR-DYS-1. (2353 aa)
dys-1Protein CBG15371. (1276 aa)
unc-45Protein CBR-UNC-45. (961 aa)
nmy-3Protein CBG15043; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1526 aa)
stn-1Protein CBR-STN-1. (422 aa)
Cbr-myo-2Protein CBR-MYO-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2009 aa)
unc-94Protein CBR-UNC-94. (406 aa)
mup-2Protein CBR-MUP-2. (421 aa)
dyc-1Protein CBR-DYC-1. (985 aa)
myo-5Protein CBR-MYO-5; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1979 aa)
unc-89Protein CBR-UNC-89. (6561 aa)
tnt-4Protein CBR-TNT-4. (308 aa)
chn-1Protein CBR-CHN-1. (266 aa)
slo-1Protein CBR-SLO-1. (1165 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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