STRINGSTRING
daf-8 daf-8 sma-4 sma-4 ints-8 ints-8 ran-5 ran-5 rnt-1 rnt-1 nhr-69 nhr-69 daf-14 daf-14 Cbr-tag-68 Cbr-tag-68 sma-2 sma-2 sma-6 sma-6 daf-5 daf-5 sma-3 sma-3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
daf-8Dwarfin sma. (585 aa)
sma-4Dwarfin sma. (603 aa)
ints-8Protein CBG08018. (958 aa)
ran-5Protein CBR-RAN-5. (390 aa)
rnt-1Protein CBR-RNT-1. (312 aa)
nhr-69Protein CBR-NHR-69. (374 aa)
daf-14Protein CBR-DAF-14. (486 aa)
Cbr-tag-68Dwarfin sma. (415 aa)
sma-2Dwarfin sma. (399 aa)
sma-6Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (629 aa)
daf-5Protein CBR-DAF-5. (720 aa)
sma-3Dwarfin sma. (365 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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