STRINGSTRING
itsn-1 itsn-1 unc-26 unc-26 ehs-1 ehs-1 CBG05923 CBG05923 snt-3 snt-3 snt-7 snt-7 nlg-1 nlg-1 snt-1 snt-1 unc-11 unc-11 glit-1 glit-1 lpd-3 lpd-3 snt-2 snt-2 unc-41 unc-41 unc-57 unc-57 sorb-1 sorb-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
itsn-1Protein CBR-ITSN-1. (1099 aa)
unc-26Protein CBR-UNC-26. (1123 aa)
ehs-1Protein CBR-EHS-1. (794 aa)
CBG05923Protein CBG05923. (1233 aa)
snt-3Protein CBR-SNT-3. (284 aa)
snt-7Protein CBR-SNT-7. (414 aa)
nlg-1Protein CBR-NLG-1. (800 aa)
snt-1Protein CBR-SNT-1. (443 aa)
unc-11Protein CBR-UNC-11. (710 aa)
glit-1Protein CBR-GLIT-1. (738 aa)
lpd-3Protein CBG14931. (3899 aa)
snt-2Protein CBR-SNT-2. (370 aa)
unc-41Protein CBR-UNC-41. (1661 aa)
unc-57Protein CBR-UNC-57. (375 aa)
sorb-1Protein CBR-SORB-1. (1129 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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