STRINGSTRING
toca-2 toca-2 lin-53 lin-53 CBG23773 CBG23773 lin-36 lin-36 sup-36 sup-36 mks-1 mks-1 src-1 src-1 CBG20846 CBG20846 mig-14 mig-14 wve-1 wve-1 umps-1 umps-1 mig-5 mig-5 sup-37 sup-37 CBG01565 CBG01565 wsp-1 wsp-1 egl-44 egl-44 dsh-2 dsh-2 gex-3 gex-3 smg-5 smg-5 lin-35 lin-35 sys-1 sys-1 mom-5 mom-5 hda-1 hda-1 ceh-40 ceh-40 let-653 let-653 smg-2 smg-2 let-413 let-413 CBG09063 CBG09063 mom-2 mom-2 lin-59 lin-59 rab-8 rab-8 rsa-2 rsa-2 swsn-7 swsn-7 CBG15416 CBG15416 smg-6 smg-6 toca-1 toca-1 ceh-20 ceh-20 ubc-18 ubc-18 lin-37 lin-37 CBG16516 CBG16516 efl-1 efl-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
toca-2Protein CBR-TOCA-2. (677 aa)
lin-53Probable histone-binding protein lin-53; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Required for hcp-3 and his-1 stabilization, localization of hcp-3 to centromeres and for proper chromosome segregation. Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that represses transcription. (416 aa)
CBG23773Protein CBG23773. (514 aa)
lin-36Protein CBR-LIN-36. (1111 aa)
sup-36Protein CBG23027. (169 aa)
mks-1Protein CBR-MKS-1. (384 aa)
src-1Tyrosine-protein kinase. (544 aa)
CBG20846Protein CBG20846. (712 aa)
mig-14Protein CBR-MIG-14. (548 aa)
wve-1Protein CBR-WVE-1. (475 aa)
umps-1Protein CBR-UMPS-1. (498 aa)
mig-5Protein CBR-MIG-5. (657 aa)
sup-37Protein CBG00762. (987 aa)
CBG01565Protein CBG01565. (188 aa)
wsp-1Protein CBR-WSP-1. (785 aa)
egl-44Protein CBR-EGL-44. (472 aa)
dsh-2Protein CBR-DSH-2. (784 aa)
gex-3Protein CBR-GEX-3. (1140 aa)
smg-5Protein CBR-SMG-5. (551 aa)
lin-35Protein CBR-LIN-35. (956 aa)
sys-1Protein CBR-SYS-1. (839 aa)
mom-5Protein CBR-MOM-5; Belongs to the G-protein coupled receptor Fz/Smo family. (570 aa)
hda-1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (455 aa)
ceh-40Protein CBG05292. (312 aa)
let-653Protein CBR-LET-653. (736 aa)
smg-2Protein CBR-SMG-2. (1051 aa)
let-413Protein CBR-LET-413. (702 aa)
CBG09063Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (455 aa)
mom-2Protein CBR-MOM-2. (358 aa)
lin-59Protein CBR-LIN-59. (1320 aa)
rab-8Protein CBR-RAB-8. (211 aa)
rsa-2Protein CBR-RSA-2. (1045 aa)
swsn-7Protein CBR-SWSN-7. (1221 aa)
CBG15416Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (470 aa)
smg-6Protein CBR-SMG-6. (773 aa)
toca-1Protein CBR-TOCA-1. (588 aa)
ceh-20Protein CBR-CEH-20. (338 aa)
ubc-18Protein CBR-UBC-18. (153 aa)
lin-37Protein CBR-LIN-37. (274 aa)
CBG16516Protein CBG16516. (225 aa)
efl-1Protein CBR-EFL-1. (303 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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