(19 nodes) Sensory perception of touch network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mec-18	Protein CBR-MEC-18. (639 aa)
	sto-2	Protein CBR-STO-2. (320 aa)
	CBG14703	Protein CBG14703. (1196 aa)
	mec-2	Protein CBR-MEC-2. (317 aa)
	mec-5	Protein CBR-MEC-5. (327 aa)
	mec-14	Protein CBR-MEC-14. (452 aa)
	sto-1	Protein CBR-STO-1. (341 aa)
	sto-4	Protein CBR-STO-4. (281 aa)
	mec-6	Protein CBR-MEC-6. (376 aa)
	sto-6	Protein CBR-STO-6. (298 aa)
	mec-1	Protein CBR-MEC-1. (2101 aa)
	mec-9	Protein CBR-MEC-9. (920 aa)
	mec-15	Protein CBG20219. (368 aa)
	mec-12	Protein CBR-MEC-12; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (611 aa)
	pkc-1	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (582 aa)
	lin-10	Protein CBR-LIN-10, isoform a. (1120 aa)
	mec-4	Degenerin mec-4; Probable sodium channel subunit. May be needed for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. (768 aa)
	mec-7	Tubulin beta-1 chain; Tubulin is the major constituent of microtubules (Probable). It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (Probable). Plays a role in mechanosensory transduction (touch sensitivity) (By similarity). (441 aa)
	mec-10	Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior. (724 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG14703	mec-1	A8XKH6	A8XUN2	Protein CBG14703.	Protein CBR-MEC-1.	0.777
CBG14703	mec-10	A8XKH6	Q60NC0	Protein CBG14703.	Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior.	0.999
CBG14703	mec-12	A8XKH6	A8XXI7	Protein CBG14703.	Protein CBR-MEC-12; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.866
CBG14703	mec-14	A8XKH6	A8XPL5	Protein CBG14703.	Protein CBR-MEC-14.	0.712
CBG14703	mec-18	A8XKH6	A8XJV8	Protein CBG14703.	Protein CBR-MEC-18.	0.803
CBG14703	mec-4	A8XKH6	Q17298	Protein CBG14703.	Degenerin mec-4; Probable sodium channel subunit. May be needed for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior.	0.999
CBG14703	mec-5	A8XKH6	A8XNC0	Protein CBG14703.	Protein CBR-MEC-5.	0.864
CBG14703	mec-6	A8XKH6	A8XGE3	Protein CBG14703.	Protein CBR-MEC-6.	0.999
CBG14703	mec-7	A8XKH6	Q17299	Protein CBG14703.	Tubulin beta-1 chain; Tubulin is the major constituent of microtubules (Probable). It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (Probable). Plays a role in mechanosensory transduction (touch sensitivity) (By similarity).	0.774
CBG14703	mec-9	A8XKH6	A8XVJ4	Protein CBG14703.	Protein CBR-MEC-9.	0.864
mec-1	CBG14703	A8XUN2	A8XKH6	Protein CBR-MEC-1.	Protein CBG14703.	0.777
mec-1	mec-10	A8XUN2	Q60NC0	Protein CBR-MEC-1.	Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior.	0.743
mec-1	mec-12	A8XUN2	A8XXI7	Protein CBR-MEC-1.	Protein CBR-MEC-12; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.744
mec-1	mec-14	A8XUN2	A8XPL5	Protein CBR-MEC-1.	Protein CBR-MEC-14.	0.742
mec-1	mec-18	A8XUN2	A8XJV8	Protein CBR-MEC-1.	Protein CBR-MEC-18.	0.762
mec-1	mec-4	A8XUN2	Q17298	Protein CBR-MEC-1.	Degenerin mec-4; Probable sodium channel subunit. May be needed for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior.	0.742
mec-1	mec-5	A8XUN2	A8XNC0	Protein CBR-MEC-1.	Protein CBR-MEC-5.	0.899
mec-1	mec-6	A8XUN2	A8XGE3	Protein CBR-MEC-1.	Protein CBR-MEC-6.	0.777
mec-1	mec-7	A8XUN2	Q17299	Protein CBR-MEC-1.	Tubulin beta-1 chain; Tubulin is the major constituent of microtubules (Probable). It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (Probable). Plays a role in mechanosensory transduction (touch sensitivity) (By similarity).	0.672
mec-10	CBG14703	Q60NC0	A8XKH6	Degenerin mec-10; Amiloride-sensitive sodium channel subunit required for mechanosensory transduction (touch sensitivity). Negatively regulates the turning step of male mating behavior.	Protein CBG14703.	0.999