STRINGSTRING
ego-1 ego-1 ifb-1 ifb-1 CBG02494 CBG02494 ifc-1 ifc-1 ifd-2 ifd-2 npp-10 npp-10 lmn-1 lmn-1 ifa-4 ifa-4 ifd-1 ifd-1 ifp-1 ifp-1 CBG16054 CBG16054 Cbr-ifa-3 Cbr-ifa-3 CBG16384 CBG16384 ifa-1 ifa-1 CBG26680 CBG26680 ifb-2 ifb-2 ifc-2 ifc-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ego-1Protein CBR-EGO-1. (1631 aa)
ifb-1Protein CBR-IFB-1; Belongs to the intermediate filament family. (558 aa)
CBG02494Protein CBG02494. (72 aa)
ifc-1Protein CBR-IFC-1; Belongs to the intermediate filament family. (482 aa)
ifd-2Protein CBR-IFD-2; Belongs to the intermediate filament family. (473 aa)
npp-10Protein CBR-NPP-10. (1684 aa)
lmn-1Protein CBR-LMN-1; Belongs to the intermediate filament family. (565 aa)
ifa-4Protein CBR-IFA-4; Belongs to the intermediate filament family. (599 aa)
ifd-1Protein CBR-IFD-1; Belongs to the intermediate filament family. (589 aa)
ifp-1Protein CBR-IFP-1; Belongs to the intermediate filament family. (903 aa)
CBG16054Protein CBG16054; Belongs to the intermediate filament family. (656 aa)
Cbr-ifa-3Protein CBR-IFA-3; Belongs to the intermediate filament family. (576 aa)
CBG16384Protein CBG16384; Belongs to the intermediate filament family. (581 aa)
ifa-1Protein CBR-IFA-1; Belongs to the intermediate filament family. (566 aa)
CBG26680Protein CBG26680. (94 aa)
ifb-2Protein CBR-IFB-2, isoform a; Belongs to the intermediate filament family. (542 aa)
ifc-2Intermediate filament protein ifc-2; Cytoplasmic intermediate filaments provide mechanical strength to cells. (621 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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