STRINGSTRING
Cbr-pat-4 Cbr-pat-4 deb-1 deb-1 CBG21690 CBG21690 pat-3 pat-3 unc-112 unc-112 lin-3 lin-3 unc-52 unc-52 unc-15 unc-15
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cbr-pat-4Protein CBR-PAT-4. (278 aa)
deb-1Protein CBR-DEB-1, isoform a. (1074 aa)
CBG21690Protein CBG21690. (1974 aa)
pat-3Integrin beta; Belongs to the integrin beta chain family. (818 aa)
unc-112Protein CBR-UNC-112. (720 aa)
lin-3Protein CBR-LIN-3. (450 aa)
unc-52Protein CBR-UNC-52. (2481 aa)
unc-15Protein CBR-UNC-15. (872 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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