STRINGSTRING
CBG03866 CBG03866 CBG08144 CBG08144 CBG08524 CBG08524 bet-1 bet-1 CBG14882 CBG14882 swsn-9 swsn-9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG03866Protein CBG03866. (1794 aa)
CBG08144Protein CBG08144. (414 aa)
CBG08524Protein CBG08524. (1917 aa)
bet-1Protein CBR-BET-1. (772 aa)
CBG14882Protein CBG14882. (159 aa)
swsn-9Protein CBR-TAG-298. (615 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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