STRINGSTRING
nmad-1 nmad-1 Cbr-gadr-3 Cbr-gadr-3 CBG00286 CBG00286 emb-27 emb-27 etc-1 etc-1 nos-3 nos-3 cdc-25.4 cdc-25.4 smk-1 smk-1 szy-20 szy-20 egl-44 egl-44 cdc-14.2 cdc-14.2 cdc-14.1 cdc-14.1 syp-1 syp-1 atz-1 atz-1 CBG05210 CBG05210 cyb-3 cyb-3 cdc-25.2 cdc-25.2 CBG07183 CBG07183 pqn-85 pqn-85 CBG07020 CBG07020 CBG06992 CBG06992 CBG06993 CBG06993 gfi-3 gfi-3 cdc-25.3 cdc-25.3 scc-3 scc-3 syx-4 syx-4 syp-2 syp-2 CBG09341 CBG09341 mat-1 mat-1 CBG11580 CBG11580 polh-1 polh-1 prg-1 prg-1 gei-17 gei-17 mat-3 mat-3 gld-2 gld-2 cdc-25.1 cdc-25.1 cki-1 cki-1 gld-3 gld-3 CBG13129 CBG13129 such-1 such-1 zyg-11 zyg-11 CBG13581 CBG13581 npp-20 npp-20 swip-10 swip-10 CBG14679 CBG14679 CBG15203 CBG15203 CBG15717 CBG15717 rod-1 rod-1 CBG16929 CBG16929 CBG16930 CBG16930 cul-2 cul-2 atx-2 atx-2 gipc-2 gipc-2 apc-11 apc-11 egl-46 egl-46 dbl-1 dbl-1 spdl-1 spdl-1 rbx-1 rbx-1 CBG21002 CBG21002 oma-2 oma-2 CBG21651 CBG21651 knl-3 knl-3 CBG22294 CBG22294 CBG22694 CBG22694 pals-36 pals-36 ndc-80 ndc-80 CBG25469 CBG25469 CBG25886 CBG25886 zwl-1 zwl-1 fem-3 fem-3 cyd-1 cyd-1 cdk-4 cdk-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nmad-1Protein CBG24043. (291 aa)
Cbr-gadr-3Protein CBR-GADR-3. (662 aa)
CBG00286Protein CBG00286. (662 aa)
emb-27Protein CBR-EMB-27. (669 aa)
etc-1Protein CBG00511. (1028 aa)
nos-3Protein CBR-NOS-3; Belongs to the nanos family. (931 aa)
cdc-25.4Protein CBR-CDC-25.4. (252 aa)
smk-1Protein CBR-SMK-1. (1124 aa)
szy-20Protein CBR-SZY-20. (514 aa)
egl-44Protein CBR-EGL-44. (472 aa)
cdc-14.2Protein CBR-CDC-14. (1044 aa)
cdc-14.1Protein CBG02450. (698 aa)
syp-1Protein CBR-SYP-1. (494 aa)
atz-1Protein CBG03320. (369 aa)
CBG05210Protein CBG05210; Belongs to the cyclin family. (290 aa)
cyb-3Protein CBR-CYB-3; Belongs to the cyclin family. (386 aa)
cdc-25.2Protein CBG06594. (540 aa)
CBG07183Protein CBG07183. (780 aa)
pqn-85Nipped-B protein. (2140 aa)
CBG07020Protein CBG07020. (211 aa)
CBG06992Protein CBG06992. (487 aa)
CBG06993Protein CBG06993. (230 aa)
gfi-3Protein CBR-GFI-3. (794 aa)
cdc-25.3Protein CBR-CDC-25.3. (302 aa)
scc-3Protein CBR-SCC-3. (1122 aa)
syx-4Protein CBR-SYX-4; Belongs to the syntaxin family. (293 aa)
syp-2Protein CBR-SYP-2. (190 aa)
CBG09341Protein CBG09341. (129 aa)
mat-1Protein CBR-MAT-1. (746 aa)
CBG11580Protein CBG11580. (118 aa)
polh-1Protein CBR-POLH-1. (594 aa)
prg-1Protein CBR-PRG-1; Belongs to the argonaute family. (826 aa)
gei-17Protein CBR-GEI-17. (675 aa)
mat-3Protein CBR-MAT-3. (667 aa)
gld-2Protein CBR-GLD-2. (870 aa)
cdc-25.1Protein CBR-CDC-25.1. (615 aa)
cki-1Protein CBR-CKI-1. (187 aa)
gld-3Protein CBR-GLD-3. (956 aa)
CBG13129Protein CBG13129. (1142 aa)
such-1Protein CBR-SUCH-1. (769 aa)
zyg-11Protein CBR-ZYG-11. (807 aa)
CBG13581Protein CBG13581. (651 aa)
npp-20Protein SEC13 homolog; Functions as a component of the nuclear pore complex (NPC) and the COPII coat; Belongs to the WD repeat SEC13 family. (306 aa)
swip-10Protein CBG14084. (492 aa)
CBG14679Protein CBG14679. (356 aa)
CBG15203Protein CBG15203. (648 aa)
CBG15717Protein CBG15717. (539 aa)
rod-1Protein CBR-ROD-1. (2213 aa)
CBG16929Protein CBG16929. (126 aa)
CBG16930Protein CBG16930. (204 aa)
cul-2Protein CBR-CUL-2; Belongs to the cullin family. (850 aa)
atx-2Protein CBR-ATX-2. (1051 aa)
gipc-2Protein CBG17992. (363 aa)
apc-11Protein CBR-APC-11. (134 aa)
egl-46Protein CBR-EGL-46. (283 aa)
dbl-1Protein CBR-DBL-1. (373 aa)
spdl-1Protein CBR-SPDL-1. (501 aa)
rbx-1Protein CBR-RBX-1. (110 aa)
CBG21002Protein CBG21002. (1108 aa)
oma-2Protein CBR-OMA-2. (379 aa)
CBG21651Protein CBG21651. (822 aa)
knl-3Protein CBR-KNL-3. (356 aa)
CBG22294Protein CBG22294. (260 aa)
CBG22694Protein CBG22694. (552 aa)
pals-36Protein CBG23490. (636 aa)
ndc-80Protein CBR-NDC-80. (599 aa)
CBG25469Protein CBG25469. (244 aa)
CBG25886Protein CBG25886. (111 aa)
zwl-1Protein zwilch homolog; Essential component of the mitotic checkpoint, which prevents cells from prematurely exiting mitosis. Required for chromosome segregation, the assembly of the dynein-dynactin and mdf-1-mdf-2 complexes onto kinetochores and spindle pole separation. Its function related to the spindle assembly machinery and kinetochore-microtubule attachments likely depends on its association in the mitotic RZZ complex. The RZZ complex recruits the spindly-like protein spdl-1 to kinetochores. To prevent irregular chromosome segregation, the complex also inhibits the attachment of [...] (639 aa)
fem-3Sex-determination protein fem-3; Required for male development. In XO (male) animals, fem-3 directs male differentiation in all tissues. In XX (hermaphrodite animals), it specifies the first 80 or so germ cells to be sperm. Negatively regulates male development when bound to tra-2. (409 aa)
cyd-1Protein CBR-CYD-1; Belongs to the cyclin family. (427 aa)
cdk-4Cyclin-dependent kinase CDK-4/6; Belongs to the protein kinase superfamily. (345 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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