STRINGSTRING
rbm-3.1.2 rbm-3.1.2 cpsf-2 cpsf-2 cfim-2 cfim-2 fipp-1 fipp-1 cpf-2 cpf-2 rbm-3.1.1 rbm-3.1.1 CBG18686 CBG18686 rbm-3.2 rbm-3.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbm-3.1.2Protein CBG18684. (84 aa)
cpsf-2Probable cleavage and polyadenylation specificity factor subunit 2; CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition. (842 aa)
cfim-2Protein CBG21723. (496 aa)
fipp-1Protein CBR-FIPP-1. (499 aa)
cpf-2Protein CBR-CPF-2. (319 aa)
rbm-3.1.1Protein CBG18692. (79 aa)
CBG18686Protein CBG18686. (84 aa)
rbm-3.2Protein CBG18685. (84 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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