STRINGSTRING
CBG25333 CBG25333 lin-12.2 lin-12.2 CBG06829 CBG06829 lin-12.1 lin-12.1 pifk-1 pifk-1 sel-12 sel-12 pxn-2 pxn-2 CBG20506 CBG20506 lag-2 lag-2 lin-29 lin-29 ctg-1 ctg-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG25333Protein CBG25333. (78 aa)
lin-12.2Protein CBR-LIN-12. (1392 aa)
CBG06829Protein CBG06829. (987 aa)
lin-12.1Protein CBG06951. (1359 aa)
pifk-1Protein CBG08090; Belongs to the PI3/PI4-kinase family. (682 aa)
sel-12Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (450 aa)
pxn-2Protein CBR-PXN-2. (1366 aa)
CBG20506Protein CBG20506. (271 aa)
lag-2Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (392 aa)
lin-29Protein CBR-LIN-29. (591 aa)
ctg-1Protein CBR-CTG-1. (383 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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