(13 nodes) Positive regulation of feeding behavior network (Caenorhabditis briggsae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	itr-1	Protein CBR-ITR-1, isoform a. (2921 aa)
	svh-1	Protein CBR-TRY-2; Belongs to the peptidase S1 family. (921 aa)
	sam-4	Protein CBG02460. (245 aa)
	nlr-1	Protein CBR-NLR-1. (1206 aa)
	hlh-6	Protein CBR-HLH-6. (144 aa)
	zmp-2	Protein CBG09830. (489 aa)
	unc-104	Protein CBR-UNC-104; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1699 aa)
	rab-6.2	Protein CBR-RAB-6.2. (205 aa)
	CBG16369	Protein CBG16369. (467 aa)
	eat-17	Protein CBG16368. (449 aa)
	act-5	Protein CBR-ACT-5. (375 aa)
	inx-3.1	Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (422 aa)
	CBG09753	Cilia- and flagella-associated protein 20; Cilium- and flagellum-specific protein that plays a role in axonemal structure organization and motility; Belongs to the CFAP20 family. (203 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG16369	eat-17	A8XNL1	A8XNL2	Protein CBG16369.	Protein CBG16368.	0.921
CBG16369	rab-6.2	A8XNL1	A8XNF2	Protein CBG16369.	Protein CBR-RAB-6.2.	0.684
act-5	itr-1	A8XS95	H8WGV2	Protein CBR-ACT-5.	Protein CBR-ITR-1, isoform a.	0.543
eat-17	CBG16369	A8XNL2	A8XNL1	Protein CBG16368.	Protein CBG16369.	0.921
eat-17	rab-6.2	A8XNL2	A8XNF2	Protein CBG16368.	Protein CBR-RAB-6.2.	0.684
itr-1	act-5	H8WGV2	A8XS95	Protein CBR-ITR-1, isoform a.	Protein CBR-ACT-5.	0.543
rab-6.2	CBG16369	A8XNF2	A8XNL1	Protein CBR-RAB-6.2.	Protein CBG16369.	0.684
rab-6.2	eat-17	A8XNF2	A8XNL2	Protein CBR-RAB-6.2.	Protein CBG16368.	0.684
svh-1	zmp-2	A8WRC5	A8X9R4	Protein CBR-TRY-2; Belongs to the peptidase S1 family.	Protein CBG09830.	0.433
zmp-2	svh-1	A8X9R4	A8WRC5	Protein CBG09830.	Protein CBR-TRY-2; Belongs to the peptidase S1 family.	0.433