(11 nodes) Positive regulation of early endosome to late endosome transport network (Caenorhabditis briggsae)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG02510	Protein CBG02510. (343 aa)
	sorf-2	Protein CBG24676. (1417 aa)
	CBG02956	Protein CBG02956. (196 aa)
	CBG02513	Protein CBG02513. (322 aa)
	tbc-2	Protein CBG02508. (944 aa)
	erm-1	Protein CBR-ERM-1. (563 aa)
	sorf-1	Protein CBG14197. (239 aa)
	CBG17621	Protein CBG17621. (62 aa)
	bec-1	Protein CBR-BEC-1. (375 aa)
	sand-1	Protein CBR-SAND-1. (460 aa)
	rab-7	Protein CBR-RAB-7. (209 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG02510	rab-7	A8WU53	A8XYS7	Protein CBG02510.	Protein CBR-RAB-7.	0.534
CBG02513	rab-7	A8WU51	A8XYS7	Protein CBG02513.	Protein CBR-RAB-7.	0.534
CBG02956	rab-7	A8WT45	A8XYS7	Protein CBG02956.	Protein CBR-RAB-7.	0.534
CBG17621	rab-7	A8XRP0	A8XYS7	Protein CBG17621.	Protein CBR-RAB-7.	0.534
bec-1	sorf-2	A8XWN4	A8WL83	Protein CBR-BEC-1.	Protein CBG24676.	0.846
rab-7	CBG02510	A8XYS7	A8WU53	Protein CBR-RAB-7.	Protein CBG02510.	0.534
rab-7	CBG02513	A8XYS7	A8WU51	Protein CBR-RAB-7.	Protein CBG02513.	0.534
rab-7	CBG02956	A8XYS7	A8WT45	Protein CBR-RAB-7.	Protein CBG02956.	0.534
rab-7	CBG17621	A8XYS7	A8XRP0	Protein CBR-RAB-7.	Protein CBG17621.	0.534
rab-7	sand-1	A8XYS7	A8XWT4	Protein CBR-RAB-7.	Protein CBR-SAND-1.	0.921
rab-7	tbc-2	A8XYS7	A8WU56	Protein CBR-RAB-7.	Protein CBG02508.	0.894
sand-1	rab-7	A8XWT4	A8XYS7	Protein CBR-SAND-1.	Protein CBR-RAB-7.	0.921
sand-1	sorf-2	A8XWT4	A8WL83	Protein CBR-SAND-1.	Protein CBG24676.	0.632
sand-1	tbc-2	A8XWT4	A8WU56	Protein CBR-SAND-1.	Protein CBG02508.	0.802
sorf-1	sorf-2	A8XJH7	A8WL83	Protein CBG14197.	Protein CBG24676.	0.972
sorf-2	bec-1	A8WL83	A8XWN4	Protein CBG24676.	Protein CBR-BEC-1.	0.846
sorf-2	sand-1	A8WL83	A8XWT4	Protein CBG24676.	Protein CBR-SAND-1.	0.632
sorf-2	sorf-1	A8WL83	A8XJH7	Protein CBG24676.	Protein CBG14197.	0.972
sorf-2	tbc-2	A8WL83	A8WU56	Protein CBG24676.	Protein CBG02508.	0.667
tbc-2	rab-7	A8WU56	A8XYS7	Protein CBG02508.	Protein CBR-RAB-7.	0.894