STRINGSTRING
arf-6 arf-6 CBG03052 CBG03052 ccm-3 ccm-3 cash-1 cash-1 farl-11 farl-11 mrck-1 mrck-1 gck-1 gck-1 cnt-1 cnt-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
arf-6Protein CBR-ARF-6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
CBG03052Protein CBG03052. (74 aa)
ccm-3Protein CBG03050. (215 aa)
cash-1Protein CBR-CASH-1. (681 aa)
farl-11Protein CBG13065. (976 aa)
mrck-1Protein CBR-MRCK-1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (1586 aa)
gck-1Protein CBR-GCK-1. (898 aa)
cnt-1Protein CBR-CNT-1. (824 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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