23 items (Caenorhabditis briggsae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG06101	Protein CBG06101. (210 aa)
	CBG02478	Protein CBG02478. (186 aa)
	nuo-1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (479 aa)
	CBG01548	Protein CBG01548. (177 aa)
	CBG24154	Protein CBG24154. (212 aa)
	nduf-2.2	Protein CBR-NDUF-2.2; Belongs to the complex I 49 kDa subunit family. (474 aa)
	CBG20020	Protein CBG20020. (150 aa)
	nduf-9	Protein CBG20301. (428 aa)
	CBG20679	Protein CBG20679. (199 aa)
	nuo-3	Protein CBR-NUO-3. (131 aa)
	CBG20772	Protein CBG20772. (164 aa)
	CBG29118	Protein CBG29118. (160 aa)
	CBG03233	Probable NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). (160 aa)
	nuo-2	Protein CBR-NUO-2; Belongs to the complex I 30 kDa subunit family. (399 aa)
	CBG12806	Protein CBG12806. (171 aa)
	nduf-7	Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). (199 aa)
	nd4l	NADH-ubiquinone oxidoreductase chain 4L; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). (77 aa)
	nd1	NADH-ubiquinone oxidoreductase chain 1; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). (291 aa)
	lpd-5	Protein CBR-LPD-5. (176 aa)
	nuo-5	Protein CBR-NUO-5; Belongs to the complex I 75 kDa subunit family. (725 aa)
	CBG11518	Protein CBG11518. (239 aa)
	nuo-6	Protein CBR-NUO-6. (172 aa)
	gas-1	Protein CBR-GAS-1; Belongs to the complex I 49 kDa subunit family. (482 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG01548	CBG02478	A8WRE4	A8WU82	Protein CBG01548.	Protein CBG02478.	0.999
CBG01548	CBG03233	A8WRE4	Q61Z75	Protein CBG01548.	Probable NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).	0.920
CBG01548	CBG06101	A8WRE4	A8X0W6	Protein CBG01548.	Protein CBG06101.	0.999
CBG01548	CBG11518	A8WRE4	A8XCT2	Protein CBG01548.	Protein CBG11518.	0.998
CBG01548	CBG12806	A8WRE4	A8XFN1	Protein CBG01548.	Protein CBG12806.	0.999
CBG01548	CBG20020	A8WRE4	A8XWY3	Protein CBG01548.	Protein CBG20020.	0.998
CBG01548	CBG20679	A8WRE4	A8XYC9	Protein CBG01548.	Protein CBG20679.	0.998
CBG01548	CBG20772	A8WRE4	A8XYK7	Protein CBG01548.	Protein CBG20772.	0.998
CBG01548	CBG24154	A8WRE4	A8WK35	Protein CBG01548.	Protein CBG24154.	0.998
CBG01548	CBG29118	A8WRE4	H8WGW1	Protein CBG01548.	Protein CBG29118.	0.988
CBG01548	gas-1	A8WRE4	A8X476	Protein CBG01548.	Protein CBR-GAS-1; Belongs to the complex I 49 kDa subunit family.	0.965
CBG01548	lpd-5	A8WRE4	A8WJL7	Protein CBG01548.	Protein CBR-LPD-5.	0.995
CBG01548	nd1	A8WRE4	Q8HEC4	Protein CBG01548.	NADH-ubiquinone oxidoreductase chain 1; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).	0.980
CBG01548	nduf-2.2	A8WRE4	A8XW68	Protein CBG01548.	Protein CBR-NDUF-2.2; Belongs to the complex I 49 kDa subunit family.	0.965
CBG01548	nduf-7	A8WRE4	A8XFG2	Protein CBG01548.	Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).	0.998
CBG01548	nduf-9	A8WRE4	A8XXH9	Protein CBG01548.	Protein CBG20301.	0.998
CBG01548	nuo-1	A8WRE4	A8WT32	Protein CBG01548.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.991
CBG01548	nuo-2	A8WRE4	A8XGA9	Protein CBG01548.	Protein CBR-NUO-2; Belongs to the complex I 30 kDa subunit family.	0.988
CBG01548	nuo-3	A8WRE4	A8Y0A4	Protein CBG01548.	Protein CBR-NUO-3.	0.999
CBG01548	nuo-5	A8WRE4	A8X2R3	Protein CBG01548.	Protein CBR-NUO-5; Belongs to the complex I 75 kDa subunit family.	0.982