126 items (Caenorhabditis briggsae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pgrn-1	Protein CBR-PGRN-1. (291 aa)
	CBG23978	Protein CBG23978. (884 aa)
	CBG24861	Protein CBG24861; Belongs to the peptidase C1 family. (323 aa)
	pcp-1.2	Protein CBR-PCP-1.2. (571 aa)
	pcp-1.1	Protein CBR-PCP-1.1. (683 aa)
	CBG00476	Protein CBG00476; Belongs to the acid ceramidase family. (351 aa)
	gba-3	Glucosylceramidase. (582 aa)
	CBG00439	Protein CBG00439. (156 aa)
	ctns-1	Cystinosin homolog; Thought to transport cystine out of lysosomes. May play a role in the degradation of engulfed apoptotic cells (By similarity). Belongs to the cystinosin family. (403 aa)
	cpr-8	Protein CBG01102; Belongs to the peptidase C1 family. (399 aa)
	cpr-5	Protein CBR-CPR-5; Belongs to the peptidase C1 family. (345 aa)
	CBG01104	Protein CBG01104; Belongs to the peptidase C1 family. (337 aa)
	CBG01307	Protein CBG01307; Belongs to the peptidase A1 family. (389 aa)
	CBG01308	Protein CBG01308; Belongs to the peptidase A1 family. (389 aa)
	CBG01356	Protein CBG01356; Belongs to the peptidase A1 family. (332 aa)
	lipl-5	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (404 aa)
	asp-13	Protein CBG01462; Belongs to the peptidase A1 family. (387 aa)
	asm-3	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (584 aa)
	CBG01899	Protein CBG01899. (108 aa)
	CBG02104	Protein CBG02104. (337 aa)
	CBG02176	Protein CBG02176. (132 aa)
	ctsa-1.2	Carboxypeptidase; Belongs to the peptidase S10 family. (453 aa)
	CBG02576	Protein CBG02576. (393 aa)
	CBG02568	Protein CBG02568. (128 aa)
	sam-4	Protein CBG02460. (245 aa)
	aagr-2	Protein CBG02276; Belongs to the glycosyl hydrolase 31 family. (953 aa)
	catp-6	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1172 aa)
	lmp-2	Protein CBR-LMP-2. (286 aa)
	cpz-1	Protein CBR-CPZ-1; Belongs to the peptidase C1 family. (306 aa)
	CBG03805	Protein CBG03805; Belongs to the peptidase C1 family. (427 aa)
	lmp-1	Protein CBR-LMP-1. (252 aa)
	asp-4	Protein CBR-ASP-4; Belongs to the peptidase A1 family. (446 aa)
	asp-9	Protein CBG05505; Belongs to the peptidase A1 family. (396 aa)
	hrg-6	Protein CBG05990. (161 aa)
	hrg-4	Protein CBG05989. (172 aa)
	cima-1	Protein CBG05932. (544 aa)
	CBG06539	Protein CBG06539; Belongs to the peptidase C1 family. (332 aa)
	CBG06541	Protein CBG06541; Belongs to the peptidase C1 family. (280 aa)
	laat-1	Protein CBG07028. (310 aa)
	CBG07690	Protein CBG07690. (278 aa)
	CBG07689	Protein CBG07689. (293 aa)
	CBG07612	Protein CBG07612. (740 aa)
	CBG07306	Protein CBG07306. (916 aa)
	CBG08024	Protein CBG08024. (116 aa)
	aagr-4	Protein CBG08162; Belongs to the glycosyl hydrolase 31 family. (920 aa)
	cup-5	Protein CBR-CUP-5. (650 aa)
	CBG09543	Protein CBG09543. (121 aa)
	lipl-1	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (405 aa)
	CBG09449	Protein CBG09449. (351 aa)
	crn-6	Protein CBR-CRN-6. (380 aa)
	flp-25	Protein CBR-FLP-25. (95 aa)
	lipl-3	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (407 aa)
	ilys-5	Protein CBR-ILYS-5. (139 aa)
	cpr-6	Protein CBR-CPR-6; Belongs to the peptidase C1 family. (389 aa)
	asp-3	Protein CBR-ASP-3; Belongs to the peptidase A1 family. (397 aa)
	exl-1	Protein CBR-EXL-1. (241 aa)
	asm-1	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (562 aa)
	CBG11523	Protein CBG11523; Belongs to the glycosyl hydrolase 31 family. (929 aa)
	CBG11306	Protein CBG11306; Belongs to the peptidase A1 family. (370 aa)
	asp-6	Protein CBR-ASP-6; Belongs to the peptidase A1 family. (389 aa)
	CBG11304	Protein CBG11304; Belongs to the peptidase A1 family. (395 aa)
	asp-5	Protein CBR-ASP-5; Belongs to the peptidase A1 family. (394 aa)
	CBG11302	Protein CBG11302; Belongs to the peptidase A1 family. (263 aa)
	ubxn-6	Protein CBR-UBXN-6. (585 aa)
	unc-108	Protein CBR-UNC-108. (214 aa)
	pcp-5	Protein CBR-PCP-5. (505 aa)
	cln-3.2	Battenin. (445 aa)
	CBG12721	Tartrate-resistant acid phosphatase type 5. (384 aa)
	zipt-15	Protein CBG13990. (421 aa)
	hrg-1	Protein CBG14327. (193 aa)
	ncr-1	Protein CBR-NCR-1. (1431 aa)
	CBG14518	Protein CBG14518. (501 aa)
	aman-1	Alpha-mannosidase. (985 aa)
	CBG14553	Protein CBG14553. (5515 aa)
	CBG14684	Protein CBG14684. (359 aa)
	asah-1	Protein CBR-ASAH-1; Belongs to the acid ceramidase family. (396 aa)
	CBG15382	Protein CBG15382; Belongs to the acid ceramidase family. (384 aa)
	chup-1	Protein CBR-TAG-130. (760 aa)
	CBG15669	GDT1 family protein. (293 aa)
	cdr-6.1	Protein CBR-CDR-6.1. (277 aa)
	CBG15989	Protein CBG15989. (563 aa)
	CBG16208	Protein CBG16208; Belongs to the glycosyl hydrolase 29 family. (485 aa)
	crn-7	Protein CBR-CRN-7. (367 aa)
	gba-1	Glucosylceramidase. (466 aa)
	gba-2	Glucosylceramidase. (518 aa)
	asm-2	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. (625 aa)
	CBG17499	Protein CBG17499; Belongs to the peptidase C1 family. (356 aa)
	CBG17760	RBR-type E3 ubiquitin transferase. (441 aa)
	CBG17826	Protein CBG17826; Belongs to the peptidase C1 family. (323 aa)
	cpr-3	Protein CBR-CPR-3; Belongs to the peptidase C1 family. (375 aa)
	lipl-4	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (423 aa)
	cpr-4	Protein CBR-CPR-4; Belongs to the peptidase C1 family. (335 aa)
	ppt-1	Protein CBR-PPT-1. (320 aa)
	aagr-3	Protein CBG19359; Belongs to the glycosyl hydrolase 31 family. (924 aa)
	lipl-2	Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (382 aa)
	CBG19476	Protein CBG19476. (106 aa)
	CBG19804	Protein CBG19804. (633 aa)
	exc-4	Protein CBR-EXC-4. (291 aa)
	mrps-27	Protein CBG19712. (425 aa)
	gba-4	Glucosylceramidase. (519 aa)
	CBG20250	Protein CBG20250. (141 aa)
	haf-9	Protein CBR-HAF-9. (825 aa)
	asp-1	Protein CBR-ASP-1; Belongs to the peptidase A1 family. (393 aa)
	CBG20331	Protein CBG20331; Belongs to the peptidase A1 family. (126 aa)
	CBG20332	Protein CBG20332; Belongs to the peptidase A1 family. (385 aa)
	rps-30	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (130 aa)
	gop-1	Protein CBR-GOP-1. (906 aa)
	arl-8	Protein CBR-ARL-8; Belongs to the small GTPase superfamily. Arf family. (185 aa)
	CBG22431	Protein CBG22431; Belongs to the peptidase C1 family. (146 aa)
	cpl-1	Protein CBR-CPL-1; Belongs to the peptidase C1 family. (336 aa)
	haf-4	Protein CBR-HAF-4. (843 aa)
	CBG22771	Protein CBG22771. (126 aa)
	CBG22707	RBR-type E3 ubiquitin transferase. (877 aa)
	cdr-1	Protein CBR-CDR-1. (276 aa)
	CBG23516	Protein CBG23516. (463 aa)
	cdr-6.2	Protein CBR-CDR-6.2. (277 aa)
	clh-6	Protein CBR-CLH-6; Belongs to the chloride channel (TC 2.A.49) family. (811 aa)
	CBG23351	Protein CBG23351; Belongs to the peptidase C1 family. (351 aa)
	cpr-1	Protein CBR-CPR-1; Belongs to the peptidase C1 family. (330 aa)
	zipt-16	Protein CBR-TAG-140. (511 aa)
	CBG23207	Protein CBG23207. (419 aa)
	CBG27310	Protein CBG27310; Belongs to the peptidase C1 family. (140 aa)
	asah-2	Protein CBG00863; Belongs to the acid ceramidase family. (399 aa)
	aagr-1	Protein CBG21275; Belongs to the glycosyl hydrolase 31 family. (886 aa)
	CBG22436	Protein CBG22436; Belongs to the peptidase C1 family. (287 aa)
	hex-1	Beta-hexosaminidase A; Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines. Degrades chitotriose (By similarity). (552 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG01104	CBG23516	A8WPK3	A8Y3Q8	Protein CBG01104; Belongs to the peptidase C1 family.	Protein CBG23516.	0.799
CBG01104	asp-3	A8WPK3	A8XC79	Protein CBG01104; Belongs to the peptidase C1 family.	Protein CBR-ASP-3; Belongs to the peptidase A1 family.	0.478
CBG01104	asp-4	A8WPK3	A8WZH3	Protein CBG01104; Belongs to the peptidase C1 family.	Protein CBR-ASP-4; Belongs to the peptidase A1 family.	0.486
CBG01104	cpl-1	A8WPK3	A8Y2M8	Protein CBG01104; Belongs to the peptidase C1 family.	Protein CBR-CPL-1; Belongs to the peptidase C1 family.	0.518
CBG01104	pgrn-1	A8WPK3	A8XM14	Protein CBG01104; Belongs to the peptidase C1 family.	Protein CBR-PGRN-1.	0.572
CBG01356	asp-3	A8WQ81	A8XC79	Protein CBG01356; Belongs to the peptidase A1 family.	Protein CBR-ASP-3; Belongs to the peptidase A1 family.	0.491
CBG01356	cpr-5	A8WQ81	A8WPK2	Protein CBG01356; Belongs to the peptidase A1 family.	Protein CBR-CPR-5; Belongs to the peptidase C1 family.	0.469
CBG01356	cpr-8	A8WQ81	A8WPK1	Protein CBG01356; Belongs to the peptidase A1 family.	Protein CBG01102; Belongs to the peptidase C1 family.	0.439
CBG02176	lmp-1	A8WS43	A8WZ24	Protein CBG02176.	Protein CBR-LMP-1.	0.599
CBG02176	lmp-2	A8WS43	A8WVM9	Protein CBG02176.	Protein CBR-LMP-2.	0.599
CBG06539	CBG23516	A8X2H1	A8Y3Q8	Protein CBG06539; Belongs to the peptidase C1 family.	Protein CBG23516.	0.772
CBG06539	asp-3	A8X2H1	A8XC79	Protein CBG06539; Belongs to the peptidase C1 family.	Protein CBR-ASP-3; Belongs to the peptidase A1 family.	0.647
CBG06539	asp-4	A8X2H1	A8WZH3	Protein CBG06539; Belongs to the peptidase C1 family.	Protein CBR-ASP-4; Belongs to the peptidase A1 family.	0.633
CBG06539	cpl-1	A8X2H1	A8Y2M8	Protein CBG06539; Belongs to the peptidase C1 family.	Protein CBR-CPL-1; Belongs to the peptidase C1 family.	0.497
CBG06539	pgrn-1	A8X2H1	A8XM14	Protein CBG06539; Belongs to the peptidase C1 family.	Protein CBR-PGRN-1.	0.552
CBG06541	CBG22431	A8X2H3	A8Y299	Protein CBG06541; Belongs to the peptidase C1 family.	Protein CBG22431; Belongs to the peptidase C1 family.	0.434
CBG06541	CBG23516	A8X2H3	A8Y3Q8	Protein CBG06541; Belongs to the peptidase C1 family.	Protein CBG23516.	0.782
CBG06541	asp-3	A8X2H3	A8XC79	Protein CBG06541; Belongs to the peptidase C1 family.	Protein CBR-ASP-3; Belongs to the peptidase A1 family.	0.734
CBG06541	asp-4	A8X2H3	A8WZH3	Protein CBG06541; Belongs to the peptidase C1 family.	Protein CBR-ASP-4; Belongs to the peptidase A1 family.	0.717
CBG06541	cpl-1	A8X2H3	A8Y2M8	Protein CBG06541; Belongs to the peptidase C1 family.	Protein CBR-CPL-1; Belongs to the peptidase C1 family.	0.492