STRINGSTRING
unc-44.1 unc-44.1 kqt-1 kqt-1 CBG12797 CBG12797 CBG18580 CBG18580 kqt-3 kqt-3 kqt-2 kqt-2 Cbr-sax-7 Cbr-sax-7 let-23 let-23 lnkn-1 lnkn-1 tbcd-1 tbcd-1 unc-44.2 unc-44.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
unc-44.1Protein CBG09456. (1857 aa)
kqt-1Protein CBR-KQT-1; Belongs to the potassium channel family. (824 aa)
CBG12797Protein CBG12797. (315 aa)
CBG18580Protein CBG18580. (3100 aa)
kqt-3Protein CBR-KQT-3; Belongs to the potassium channel family. (631 aa)
kqt-2Protein CBR-KQT-2; Belongs to the potassium channel family. (638 aa)
Cbr-sax-7Protein CBR-SAX-7. (1402 aa)
let-23Receptor protein-tyrosine kinase. (1379 aa)
lnkn-1Protein CBR-TAG-256. (598 aa)
tbcd-1Protein CBG04073. (1228 aa)
unc-44.2Protein CBG09473. (5237 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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