STRINGSTRING
ddb-1 ddb-1 rad-51 rad-51 trul-1 trul-1 rpap-3 rpap-3 CBG27765 CBG27765 gad-1 gad-1 CBG18388 CBG18388 com-1 com-1 csb-1 csb-1 set-23 set-23 polh-1 polh-1 CBG10146 CBG10146 cosa-1 cosa-1 CBG01803 CBG01803 wrn-1 wrn-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ddb-1Protein CBR-DDB-1. (1134 aa)
rad-51DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (357 aa)
trul-1Protein CBG07021. (516 aa)
rpap-3Protein CBG26455. (297 aa)
CBG27765Protein CBG27765. (421 aa)
gad-1Protein CBR-GAD-1. (621 aa)
CBG18388Protein CBG18388. (995 aa)
com-1Protein CBR-COM-1. (641 aa)
csb-1Protein CBR-CSB-1. (1015 aa)
set-23Probable histone-lysine N-methyltransferase set-23; Probable histone methyltransferase required for embryonic development; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (241 aa)
polh-1Protein CBR-POLH-1. (594 aa)
CBG10146Protein CBG10146. (321 aa)
cosa-1Protein CBG09841. (286 aa)
CBG01803Protein CBG01803. (313 aa)
wrn-1Protein CBR-WRN-1. (1061 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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