(96 nodes) Tyrosine-specific protein phosphatases domain network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ptp-2	Protein CBR-PTP-2. (692 aa)
	CBG24681	Protein CBG24681. (313 aa)
	CBG00285	Protein CBG00285. (226 aa)
	CBG00373	Protein CBG00373. (643 aa)
	CBG00613	Protein CBG00613. (693 aa)
	CBG00545	Protein CBG00545. (188 aa)
	CBG00946	Protein CBG00946. (508 aa)
	pir-1	Protein CBR-PIR-1. (241 aa)
	CBG01136	Protein CBG01136. (1404 aa)
	CBG01487	Protein CBG01487. (1165 aa)
	CBG02250	Protein CBG02250. (493 aa)
	dep-1	Protein CBR-DEP-1. (1385 aa)
	ptp-3	Protein CBR-PTP-3. (1462 aa)
	CBG02812	Protein CBG02812. (389 aa)
	CBG02807	Protein CBG02807. (552 aa)
	cdc-14.2	Protein CBR-CDC-14. (1044 aa)
	cdc-14.1	Protein CBG02450. (698 aa)
	clr-1	Protein CBR-CLR-1. (1471 aa)
	vhp-1	Protein CBR-VHP-1. (672 aa)
	ptp-5.3	Protein CBG02314. (479 aa)
	ptp-4	Protein CBG03399. (1247 aa)
	CBG04012	Protein CBG04012. (571 aa)
	cel-1	Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (649 aa)
	CBG03761	Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (649 aa)
	CBG03773	Protein CBG03773. (272 aa)
	Cbr-pph-2	Protein CBR-PPH-2. (410 aa)
	CBG04241	Protein CBG04241. (348 aa)
	CBG04541	Protein CBG04541. (299 aa)
	CBG05196	Protein CBG05196. (492 aa)
	CBG05371	Protein CBG05371. (392 aa)
	CBG05851	Protein CBG05851. (446 aa)
	lip-1	Protein CBR-LIP-1. (376 aa)
	CBG07970	Protein CBG07970. (527 aa)
	CBG08005	Protein CBG08005. (461 aa)
	CBG08352	Protein CBG08352. (368 aa)
	CBG08394	Protein CBG08394. (463 aa)
	CBG09113	Protein CBG09113. (189 aa)
	ida-1	Protein CBR-IDA-1. (722 aa)
	ptp-1	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (1024 aa)
	CBG09952	Protein CBG09952. (294 aa)
	CBG10041	Protein CBG10041. (274 aa)
	emb-30	Protein CBR-EMB-30. (1439 aa)
	CBG10528	Protein CBG10528. (1446 aa)
	CBG11739	Protein CBG11739. (393 aa)
	CBG11717	Protein CBG11717. (1495 aa)
	egg-4	Protein CBR-EGG-4. (752 aa)
	CBG12331	Protein CBG12331. (346 aa)
	CBG12625	Protein CBG12625. (439 aa)
	CBG12692	Protein CBG12692. (380 aa)
	CBG12715	Protein CBG12715. (547 aa)
	CBG12739	Protein CBG12739. (546 aa)
	CBG12743	Protein CBG12743. (343 aa)
	CBG13187	Protein CBG13187. (447 aa)
	CBG13306	Protein CBG13306. (274 aa)
	daf-18	Protein CBR-DAF-18. (992 aa)
	Cbr-prl-1	Protein CBR-PRL-1. (153 aa)
	CBG14753	Protein CBG14753. (173 aa)
	CBG14908	Protein CBG14908. (368 aa)
	CBG15108	Protein CBG15108. (353 aa)
	CBG15158	Protein CBG15158. (1297 aa)
	CBG15654	Protein CBG15654. (1336 aa)
	CBG15664	Protein CBG15664; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (200 aa)
	Cbr-hpo-7	Protein CBR-HPO-7. (1336 aa)
	CBG17743	Protein CBG17743. (557 aa)
	CBG17666	Protein CBG17666. (516 aa)
	CBG18235	Protein CBG18235. (348 aa)
	CBG18331	Protein CBG18331. (476 aa)
	CBG17956	Protein CBG17956. (277 aa)
	CBG18048	Protein CBG18048. (308 aa)
	CBG19279	Protein CBG19279. (293 aa)
	CBG19747	Protein CBG19747. (410 aa)
	CBG19727	Protein CBG19727. (532 aa)
	CBG20059	Protein CBG20059. (623 aa)
	CBG20279	Protein CBG20279. (354 aa)
	CBG20357	Protein CBG20357. (385 aa)
	egg-3	Protein CBR-EGG-3. (419 aa)
	Cbr-sre-45	Protein CBR-SRE-45. (767 aa)
	CBG20918	Protein CBG20918. (1587 aa)
	CBG20941	Protein CBG20941. (470 aa)
	CBG21032	Protein CBG21032. (526 aa)
	CBG22148	Protein CBG22148. (327 aa)
	CBG22220	Protein CBG22220. (566 aa)
	CBG22503	Protein CBG22503. (508 aa)
	CBG22522	Protein CBG22522. (1206 aa)
	CBG22553	Protein CBG22553. (1058 aa)
	CBG22554	Protein CBG22554. (378 aa)
	CBG22995	Protein CBG22995. (494 aa)
	CBG23275	Protein CBG23275. (364 aa)
	CBG12522	Protein CBG12522. (310 aa)
	CBG26392	Protein CBG26392. (269 aa)
	CBG26531	Protein CBG26531. (519 aa)
	CBG25833	Protein CBG25833. (199 aa)
	CBG23640	Protein CBG23640. (476 aa)
	CBG16631	Protein CBG16631. (404 aa)
	CBG08760	Protein CBG08760. (331 aa)
	CBG19822	Protein CBG19822. (126 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG00373	CBG05371	A8WMX8	A8WZQ1	Protein CBG00373.	Protein CBG05371.	0.522
CBG00373	CBG08760	A8WMX8	H8WH03	Protein CBG00373.	Protein CBG08760.	0.408
CBG00373	CBG12692	A8WMX8	A8XGD0	Protein CBG00373.	Protein CBG12692.	0.483
CBG00373	CBG13306	A8WMX8	A8XHJ1	Protein CBG00373.	Protein CBG13306.	0.408
CBG00373	CBG17666	A8WMX8	A8XRK5	Protein CBG00373.	Protein CBG17666.	0.408
CBG00373	CBG17956	A8WMX8	A8XSN5	Protein CBG00373.	Protein CBG17956.	0.408
CBG00373	CBG18048	A8WMX8	A8XSX2	Protein CBG00373.	Protein CBG18048.	0.408
CBG00373	CBG19727	A8WMX8	A8XWG7	Protein CBG00373.	Protein CBG19727.	0.487
CBG00373	CBG19822	A8WMX8	H8WHA9	Protein CBG00373.	Protein CBG19822.	0.408
CBG00373	CBG20279	A8WMX8	A8XXG9	Protein CBG00373.	Protein CBG20279.	0.509
CBG00373	CBG20357	A8WMX8	A8XXM0	Protein CBG00373.	Protein CBG20357.	0.487
CBG00373	CBG22503	A8WMX8	A8Y2F2	Protein CBG00373.	Protein CBG22503.	0.589
CBG00373	CBG23275	A8WMX8	A8Y4A8	Protein CBG00373.	Protein CBG23275.	0.492
CBG00946	CBG05371	A8WP96	A8WZQ1	Protein CBG00946.	Protein CBG05371.	0.408
CBG00946	CBG22503	A8WP96	A8Y2F2	Protein CBG00946.	Protein CBG22503.	0.423
CBG04241	CBG20279	A8WX12	A8XXG9	Protein CBG04241.	Protein CBG20279.	0.502
CBG04241	CBG22503	A8WX12	A8Y2F2	Protein CBG04241.	Protein CBG22503.	0.407
CBG04241	CBG22554	A8WX12	A8Y2J6	Protein CBG04241.	Protein CBG22554.	0.411
CBG05371	CBG00373	A8WZQ1	A8WMX8	Protein CBG05371.	Protein CBG00373.	0.522
CBG05371	CBG00946	A8WZQ1	A8WP96	Protein CBG05371.	Protein CBG00946.	0.408