STRINGSTRING
cul-3 cul-3 cul-5 cul-5 cul-4 cul-4 CBG17039 CBG17039 CBG17038 CBG17038 cul-2 cul-2 cul-1 cul-1 CBG19647 CBG19647 apc-2 apc-2 CBG27741 CBG27741
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cul-3Protein CBR-CUL-3; Belongs to the cullin family. (810 aa)
cul-5Protein CBR-CUL-5; Belongs to the cullin family. (766 aa)
cul-4Protein CBR-CUL-4; Belongs to the cullin family. (867 aa)
CBG17039Protein CBG17039; Belongs to the cullin family. (719 aa)
CBG17038Protein CBG17038; Belongs to the cullin family. (771 aa)
cul-2Protein CBR-CUL-2; Belongs to the cullin family. (850 aa)
cul-1Protein CBR-CUL-1; Belongs to the cullin family. (768 aa)
CBG19647Protein CBG19647; Belongs to the cullin family. (528 aa)
apc-2Protein CBR-APC-2; Belongs to the cullin family. (700 aa)
CBG27741Protein CBG27741; Belongs to the cullin family. (134 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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