STRINGSTRING
cnk-1 cnk-1 CBG01454 CBG01454 shn-1 shn-1 dgk-4 dgk-4 tir-1 tir-1 CBG03616 CBG03616 syd-2 syd-2 CBG05626 CBG05626 mlt-3 mlt-3 bcc-1 bcc-1 hlb-1 hlb-1 ave-1 ave-1 nab-1 nab-1 CBG14086 CBG14086 CBG16074 CBG16074 zak-1 zak-1 CBG21086 CBG21086 CBG04143 CBG04143
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cnk-1Protein CBR-CNK-1. (808 aa)
CBG01454Protein CBG01454. (636 aa)
shn-1Protein CBR-SHN-1. (1137 aa)
dgk-4Diacylglycerol kinase. (1436 aa)
tir-1Protein CBR-TIR-1. (585 aa)
CBG03616Protein CBG03616. (379 aa)
syd-2Protein CBR-SYD-2. (1152 aa)
CBG05626Protein CBG05626. (350 aa)
mlt-3Protein CBG06255. (396 aa)
bcc-1Protein CBR-BCC-1. (571 aa)
hlb-1Protein CBR-HLB-1. (912 aa)
ave-1Protein CBR-AVE-1. (136 aa)
nab-1Protein CBR-NAB-1. (742 aa)
CBG14086Protein CBG14086. (493 aa)
CBG16074Protein CBG16074. (1209 aa)
zak-1Protein CBR-ZAK-1. (769 aa)
CBG21086Protein CBG21086. (541 aa)
CBG04143Protein CBG04143. (713 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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