STRINGSTRING
wrt-6 wrt-6 hog-1 hog-1 grd-1 grd-1 qua-1 qua-1 wrt-4 wrt-4 wrt-1 wrt-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
wrt-6Protein CBR-WRT-6. (628 aa)
hog-1Protein CBR-HOG-1. (195 aa)
grd-1Protein CBR-GRD-1. (1210 aa)
qua-1Protein CBR-QUA-1. (1233 aa)
wrt-4Protein CBR-WRT-4. (555 aa)
wrt-1Protein CBR-WRT-1. (490 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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