STRINGSTRING
CBG00606 CBG00606 ttm-1 ttm-1 CBG16727 CBG16727 CBG20465 CBG20465 toc-1 toc-1 cdf-2 cdf-2 CBG01706 CBG01706 cdf-1 cdf-1 CBG08742 CBG08742 CBG08831 CBG08831 CBG09837 CBG09837 CBG10923 CBG10923
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG00606Protein CBG00606. (440 aa)
ttm-1Protein CBR-TTM-1. (388 aa)
CBG16727Protein CBG16727. (341 aa)
CBG20465Protein CBG20465. (349 aa)
toc-1Protein CBR-TOC-1. (413 aa)
cdf-2Protein CBR-CDF-2. (360 aa)
CBG01706Protein CBG01706. (366 aa)
cdf-1Protein CBR-CDF-1. (545 aa)
CBG08742Protein CBG08742. (746 aa)
CBG08831Protein CBG08831. (493 aa)
CBG09837Protein CBG09837. (420 aa)
CBG10923Protein CBG10923. (332 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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