STRINGSTRING
CBG23770 CBG23770 CBG23920 CBG23920 rfc-4 rfc-4 cdc-48.2 cdc-48.2 pch-2 pch-2 bcs-1 bcs-1 cdc-48.1 cdc-48.1 mspn-1 mspn-1 ctf-18 ctf-18 mei-1 mei-1 CBG04167 CBG04167 rfc-1 rfc-1 CBG04772 CBG04772 lex-1 lex-1 rpt-4 rpt-4 prx-1 prx-1 CBG07244 CBG07244 cdc-48.3 cdc-48.3 prx-6 prx-6 rpt-3 rpt-3 rpt-2 rpt-2 CBG11069 CBG11069 rpt-6 rpt-6 CBG11883 CBG11883 cdc-6 cdc-6 lonp-1 lonp-1 rpt-5 rpt-5 spg-7 spg-7 Cbr-rfc-4.1 Cbr-rfc-4.1 CBG16820 CBG16820 orc-1 orc-1 ymel-1 ymel-1 atad-3 atad-3 spas-1 spas-1 nsf-1 nsf-1 mac-1 mac-1 CBG21002 CBG21002 vps-4 vps-4 lonp-2 lonp-2 rfc-2 rfc-2 CBG22959 CBG22959 rpt-1 rpt-1 CBG20339 CBG20339 figl-1 figl-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG23770Protein CBG23770. (299 aa)
CBG23920Protein CBG23920; Belongs to the AAA ATPase family. (268 aa)
rfc-4Protein CBR-RFC-4.2. (335 aa)
cdc-48.2Protein CBG00746; Belongs to the AAA ATPase family. (811 aa)
pch-2Protein CBR-PCH-2; Belongs to the AAA ATPase family. (421 aa)
bcs-1Protein CBG00560; Belongs to the AAA ATPase family. (441 aa)
cdc-48.1Protein CBG03070; Belongs to the AAA ATPase family. (865 aa)
mspn-1Protein CBG03401; Belongs to the AAA ATPase family. (341 aa)
ctf-18Protein CBG03417. (840 aa)
mei-1Meiotic spindle formation protein mei-1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays. This activity may promote rapid reorganization of cellular microtubule arrays. Required specifically for meiotic spindle formation in the female germline; the presence of this protein is inimical to the formation of mitotic spindles. (484 aa)
CBG04167Protein CBG04167. (489 aa)
rfc-1Replication factor C subunit 1. (835 aa)
CBG04772Protein CBG04772; Belongs to the AAA ATPase family. (426 aa)
lex-1Tat-binding homolog 7; Thought to form a complex that enhances transcription from repetitive DNA sequences by modulating chromatin structure. (1285 aa)
rpt-4Protein CBR-RPT-4; Belongs to the AAA ATPase family. (398 aa)
prx-1Protein CBR-PRX-1. (600 aa)
CBG07244Protein CBG07244; Belongs to the AAA ATPase family. (353 aa)
cdc-48.3Protein CBR-CDC-48.3. (736 aa)
prx-6Protein CBR-PRX-6. (724 aa)
rpt-3Protein CBR-RPT-3; Belongs to the AAA ATPase family. (417 aa)
rpt-2Protein CBR-RPT-2; Belongs to the AAA ATPase family. (443 aa)
CBG11069Protein CBG11069; Belongs to the AAA ATPase family. (438 aa)
rpt-6Protein CBR-RPT-6; Belongs to the AAA ATPase family. (417 aa)
CBG11883Protein CBG11883. (607 aa)
cdc-6Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. (531 aa)
lonp-1Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (960 aa)
rpt-5Protein CBR-RPT-5; Belongs to the AAA ATPase family. (430 aa)
spg-7Protein CBR-SPG-7. (814 aa)
Cbr-rfc-4.1Protein CBR-RFC-4.1. (340 aa)
CBG16820Protein CBG16820. (749 aa)
orc-1Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (651 aa)
ymel-1Protein CBR-YMEL-1; Belongs to the AAA ATPase family. (670 aa)
atad-3Protein CBR-ATAD-3. (596 aa)
spas-1Probable spastin homolog spas-1; Severs microtubules, probably in an ATP-dependent fashion. Belongs to the AAA ATPase family. Spastin subfamily. (542 aa)
nsf-1Protein CBR-NSF-1. (754 aa)
mac-1Protein CBR-MAC-1. (826 aa)
CBG21002Protein CBG21002. (1108 aa)
vps-4Protein CBR-VPS-4; Belongs to the AAA ATPase family. (295 aa)
lonp-2Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. (773 aa)
rfc-2Protein CBR-RFC-2. (329 aa)
CBG22959Serine/threonine-protein phosphatase. (551 aa)
rpt-1Protein CBR-RPT-1; Belongs to the AAA ATPase family. (435 aa)
CBG20339Protein CBG20339; Belongs to the AAA ATPase family. (415 aa)
figl-1Fidgetin-like protein 1; Has a role in spindle assembly which acts in the progression through mitosis during embryogenesis. Required for fertility (By similarity). (591 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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