(45 nodes) Peptidase, metallopeptidase network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG15909	Protein CBG15909. (87 aa)
	nas-24	Zinc metalloproteinase. (407 aa)
	nas-39	Protein CBR-NAS-39. (1016 aa)
	dpy-31	Zinc metalloproteinase. (593 aa)
	nas-10	Protein CBR-NAS-10. (599 aa)
	nas-32	Zinc metalloproteinase. (667 aa)
	nas-3	Metalloendopeptidase. (301 aa)
	nas-4	Metalloendopeptidase. (319 aa)
	CBG21082	Metalloendopeptidase. (412 aa)
	nas-28	Zinc metalloproteinase. (505 aa)
	nas-1	Metalloendopeptidase. (269 aa)
	nas-22	Zinc metalloproteinase. (397 aa)
	CBG23213	Zinc metalloproteinase. (355 aa)
	nas-20	Zinc metalloproteinase. (373 aa)
	nas-17	Zinc metalloproteinase. (429 aa)
	Cbr-srg-54	Serpentine receptor class gamma; Belongs to the peptidase M10A family. (639 aa)
	CBG27502	Protein CBG27502. (282 aa)
	nas-36	Zinc metalloproteinase nas-36; Mtalloprotease. Involved in molting, a process during larval stages in which a new cuticle is formed and the old cuticle is shed. (616 aa)
	zmp-6	Protein CBG24150. (214 aa)
	zmp-5	Protein CBG00098. (381 aa)
	nas-6	Metalloendopeptidase. (341 aa)
	nas-14	Metalloendopeptidase. (502 aa)
	nas-37	Metalloendopeptidase. (787 aa)
	nas-25	Zinc metalloproteinase. (421 aa)
	nas-29	Zinc metalloproteinase. (532 aa)
	nas-12	Metalloendopeptidase. (399 aa)
	nas-5	Metalloendopeptidase. (372 aa)
	nas-33	Zinc metalloproteinase. (606 aa)
	nas-30	Metalloendopeptidase. (842 aa)
	nas-8	Metalloendopeptidase. (400 aa)
	zmp-3	Protein CBG06459. (599 aa)
	nas-27	Zinc metalloproteinase. (399 aa)
	nas-13	Metalloendopeptidase. (411 aa)
	hch-1	Zinc metalloproteinase. (610 aa)
	nas-15	Metalloendopeptidase. (558 aa)
	nas-38	Zinc metalloproteinase. (725 aa)
	nas-9	Metalloendopeptidase. (560 aa)
	zmp-1	Protein CBR-ZMP-1. (517 aa)
	toh-1	Zinc metalloproteinase. (436 aa)
	nas-31	Zinc metalloproteinase. (610 aa)
	zmp-2	Protein CBG09830. (489 aa)
	nas-11	Metalloendopeptidase. (581 aa)
	nas-23	Zinc metalloproteinase. (537 aa)
	nas-7	Metalloendopeptidase. (389 aa)
	CBG15715	Protein CBG15715. (190 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG15715	zmp-1	A8XML5	A8X7X2	Protein CBG15715.	Protein CBR-ZMP-1.	0.603
CBG15715	zmp-6	A8XML5	A8WK31	Protein CBG15715.	Protein CBG24150.	0.559
CBG15909	nas-12	A8XN19	A8WUY0	Protein CBG15909.	Metalloendopeptidase.	0.646
CBG15909	nas-3	A8XN19	A8XV91	Protein CBG15909.	Metalloendopeptidase.	0.549
CBG15909	nas-8	A8XN19	A8X1N9	Protein CBG15909.	Metalloendopeptidase.	0.564
CBG23213	nas-12	A8Y4G0	A8WUY0	Zinc metalloproteinase.	Metalloendopeptidase.	0.498
CBG23213	nas-5	A8Y4G0	A8WWW8	Zinc metalloproteinase.	Metalloendopeptidase.	0.509
CBG23213	zmp-1	A8Y4G0	A8X7X2	Zinc metalloproteinase.	Protein CBR-ZMP-1.	0.484
Cbr-srg-54	dpy-31	B0K083	A8XPL8	Serpentine receptor class gamma; Belongs to the peptidase M10A family.	Zinc metalloproteinase.	0.646
dpy-31	Cbr-srg-54	A8XPL8	B0K083	Zinc metalloproteinase.	Serpentine receptor class gamma; Belongs to the peptidase M10A family.	0.646
dpy-31	zmp-1	A8XPL8	A8X7X2	Zinc metalloproteinase.	Protein CBR-ZMP-1.	0.494
dpy-31	zmp-5	A8XPL8	A8WMA4	Zinc metalloproteinase.	Protein CBG00098.	0.643
hch-1	zmp-1	A8X4J0	A8X7X2	Zinc metalloproteinase.	Protein CBR-ZMP-1.	0.495
nas-1	nas-33	A8XZK9	A8WZ36	Metalloendopeptidase.	Zinc metalloproteinase.	0.478
nas-11	nas-3	A8XC66	A8XV91	Metalloendopeptidase.	Metalloendopeptidase.	0.466
nas-12	CBG15909	A8WUY0	A8XN19	Metalloendopeptidase.	Protein CBG15909.	0.646
nas-12	CBG23213	A8WUY0	A8Y4G0	Metalloendopeptidase.	Zinc metalloproteinase.	0.498
nas-12	nas-24	A8WUY0	A8XN24	Metalloendopeptidase.	Zinc metalloproteinase.	0.708
nas-12	nas-25	A8WUY0	A8WSL1	Metalloendopeptidase.	Zinc metalloproteinase.	0.404
nas-15	nas-33	A8X5U8	A8WZ36	Metalloendopeptidase.	Zinc metalloproteinase.	0.479