(56 nodes) Zinc finger, FYVE/PHD-type network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	exc-5	Protein CBR-EXC-5. (859 aa)
	rbr-2	Lysine-specific demethylase rbr-2; Histone demethylase that specifically demethylates 'Lys-4' of histone H3, thereby playing a central role in histone code. Does not demethylate histone H3 'Lys-9', H3 'Lys-27', H3 'Lys-36', H3 'Lys-79' or H4 'Lys-20'. Demethylates trimethylated and dimethylated but not monomethylated H3 'Lys-4'. Involved in larval development and vulva formation (By similarity). (1482 aa)
	CBG11090	Protein CBG11090. (508 aa)
	CBG25753	Protein CBG25753. (446 aa)
	CBG22012	Protein CBG22012. (613 aa)
	ash-2	Protein CBR-ASH-2. (557 aa)
	ing-3	Inhibitor of growth protein. (502 aa)
	wdfy-2	WD repeat and FYVE domain-containing protein 2; Plays a role in coelomocyte endocytosis. (417 aa)
	CBG18437	Protein CBG18437. (527 aa)
	athp-1	Protein CBR-ATHP-1. (1200 aa)
	set-16	Protein CBR-SET-16. (2526 aa)
	ppk-3	Protein CBR-PPK-3. (1494 aa)
	rbf-1	Protein CBR-RBF-1. (1021 aa)
	phf-15	Protein CBR-PHF-15. (860 aa)
	Cbr-tag-77	Protein CBR-TAG-77. (1010 aa)
	lst-2	Lateral signaling target protein 2; Negative regulator of epidermal growth factor receptor (EGFR) signaling. (651 aa)
	CBG13933	Protein CBG13933. (1375 aa)
	lsy-13	Protein CBG13684. (277 aa)
	Cbr-set-26	Protein CBR-SET-26. (1809 aa)
	CBG13665	Protein CBG13665. (1174 aa)
	aka-1	Protein CBR-AKA-1. (1337 aa)
	lin-59	Protein CBR-LIN-59. (1320 aa)
	nurf-1	Protein CBR-NURF-1. (1674 aa)
	unc-10	Protein CBR-UNC-10. (1636 aa)
	CBG10766	Protein CBG10766. (164 aa)
	CBG10765	Protein CBG10765. (431 aa)
	CBG10189	Protein CBG10189. (846 aa)
	CBG10190	Protein CBG10190. (650 aa)
	CBG10193	Protein CBG10193. (1044 aa)
	CBG10230	Protein CBG10230. (713 aa)
	CBG10260	Protein CBG10260. (722 aa)
	CBG09969	Protein CBG09969. (568 aa)
	let-418	Protein CBR-LET-418. (1863 aa)
	mtm-3	Protein CBR-MTM-3. (1008 aa)
	dpff-1	Protein CBR-DPFF-1. (377 aa)
	rabn-5	Protein CBR-RABN-5. (413 aa)
	CBG08571	Protein CBG08571. (395 aa)
	ugt-63	Protein CBR-UGT-63. (943 aa)
	CBG08497	Protein CBG08497. (339 aa)
	CBG07847	Protein CBG07847. (557 aa)
	CBG07029	Protein CBG07029. (450 aa)
	zfp-1	Protein CBR-ZFP-1. (914 aa)
	eea-1	Protein CBR-EEA-1. (1221 aa)
	phf-14	Protein CBR-PHF-14. (571 aa)
	mys-4	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (621 aa)
	madf-3	Protein CBR-ATHP-2. (1796 aa)
	lin-49	Protein CBR-LIN-49. (1052 aa)
	wdfy-3	Protein CBG03484. (3387 aa)
	CBG02160	Protein CBG02160. (395 aa)
	nra-3	Protein CBR-NRA-3. (1012 aa)
	rabs-5	Protein CBR-RABS-5. (558 aa)
	hgrs-1	Protein CBR-HGRS-1. (728 aa)
	jmjd-1.2	Protein CBR-JMJD-1.2. (761 aa)
	phf-30	Protein CBR-PHF-30. (238 aa)
	CBG00879	Protein CBG00879. (949 aa)
	baz-2	Protein CBR-FLT-1. (1439 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG02160	ing-3	A8WS31	A8XYC8	Protein CBG02160.	Inhibitor of growth protein.	0.426
CBG02160	mys-4	A8WS31	A8WW58	Protein CBG02160.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.425
CBG07029	ing-3	A8X3V5	A8XYC8	Protein CBG07029.	Inhibitor of growth protein.	0.540
CBG07029	lin-49	A8X3V5	A8WV80	Protein CBG07029.	Protein CBR-LIN-49.	0.687
CBG07029	mys-4	A8X3V5	A8WW58	Protein CBG07029.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.598
CBG07847	CBG11090	A8X595	E3CU21	Protein CBG07847.	Protein CBG11090.	0.669
CBG07847	athp-1	A8X595	A8XSC8	Protein CBG07847.	Protein CBR-ATHP-1.	0.600
CBG07847	let-418	A8X595	A8X9E2	Protein CBG07847.	Protein CBR-LET-418.	0.400
CBG07847	lin-49	A8X595	A8WV80	Protein CBG07847.	Protein CBR-LIN-49.	0.693
CBG07847	mys-4	A8X595	A8WW58	Protein CBG07847.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.650
CBG07847	nurf-1	A8X595	A8XCE3	Protein CBG07847.	Protein CBR-NURF-1.	0.669
CBG07847	phf-15	A8X595	A8XMJ3	Protein CBG07847.	Protein CBR-PHF-15.	0.402
CBG07847	wdfy-2	A8X595	A8XXC7	Protein CBG07847.	WD repeat and FYVE domain-containing protein 2; Plays a role in coelomocyte endocytosis.	0.712
CBG08497	unc-10	A8X6Q0	A8XC13	Protein CBG08497.	Protein CBR-UNC-10.	0.614
CBG10193	ash-2	A8XAV4	A8XZ73	Protein CBG10193.	Protein CBR-ASH-2.	0.737
CBG10230	exc-5	A8XAT2	A8WJW3	Protein CBG10230.	Protein CBR-EXC-5.	0.542
CBG10230	rabn-5	A8XAT2	A8X7V8	Protein CBG10230.	Protein CBR-RABN-5.	0.545
CBG10230	wdfy-2	A8XAT2	A8XXC7	Protein CBG10230.	WD repeat and FYVE domain-containing protein 2; Plays a role in coelomocyte endocytosis.	0.546
CBG11090	CBG07847	E3CU21	A8X595	Protein CBG11090.	Protein CBG07847.	0.669
CBG11090	ash-2	E3CU21	A8XZ73	Protein CBG11090.	Protein CBR-ASH-2.	0.865