STRINGSTRING
CBG20577 CBG20577 dus-2 dus-2 CBG18886 CBG18886 CBG16084 CBG16084 aldo-1 aldo-1 CBG15299 CBG15299 dpyd-1 dpyd-1 nprt-1 nprt-1 CBG12371 CBG12371 Cbr-rpl-16 Cbr-rpl-16 CBG09249 CBG09249 aldo-2 aldo-2 CBG08326 CBG08326 CBG05718 CBG05718 dhod-1 dhod-1 CBG02379 CBG02379 CBG01975 CBG01975 CBG01337 CBG01337 CBG01351 CBG01351 tald-1 tald-1 CBG01477 CBG01477 CBG23625 CBG23625 umps-1 umps-1 chhy-1 chhy-1 CBG27447 CBG27447 pyc-1 pyc-1 gana-1 gana-1 CBG23028 CBG23028 CBG22170 CBG22170 tpi-1 tpi-1 CBG20578 CBG20578
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG20577Protein CBG20577. (445 aa)
dus-2Protein CBG19749. (436 aa)
CBG18886Protein CBG18886. (455 aa)
CBG16084Protein CBG16084. (568 aa)
aldo-1Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (365 aa)
CBG15299Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. (229 aa)
dpyd-1Probable dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine. Also involved the degradation of the chemotherapeutic drug 5-fluorouracil (By similarity). Belongs to the dihydropyrimidine dehydrogenase family. (1053 aa)
nprt-1Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. (562 aa)
CBG12371Protein CBG12371. (527 aa)
Cbr-rpl-16Protein CBR-RPL-16; Belongs to the universal ribosomal protein uL13 family. (584 aa)
CBG09249Protein CBG09249. (421 aa)
aldo-2Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family. (366 aa)
CBG08326tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. (551 aa)
CBG05718Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. (534 aa)
dhod-1Protein CBR-DHOD-1. (426 aa)
CBG02379Protein CBG02379. (303 aa)
CBG01975Protein CBG01975. (2174 aa)
CBG01337Protein CBG01337; Belongs to the UDP-glycosyltransferase family. (849 aa)
CBG01351Protein CBG01351. (451 aa)
tald-1Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (338 aa)
CBG01477Protein CBG01477. (372 aa)
CBG23625GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. (358 aa)
umps-1Protein CBR-UMPS-1. (498 aa)
chhy-1Hyaluronidase. (470 aa)
CBG27447Protein CBG27447. (111 aa)
pyc-1Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1166 aa)
gana-1Alpha-galactosidase. (452 aa)
CBG23028tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family. (283 aa)
CBG22170Protein CBG22170. (318 aa)
tpi-1Triosephosphate isomerase. (247 aa)
CBG20578Protein CBG20578. (386 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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