STRINGSTRING
tln-1 tln-1 ptp-1 ptp-1 max-1.1 max-1.1 max-1.2 max-1.2 frm-2 frm-2 frm-1 frm-1 frm-10 frm-10 ech-4 ech-4 CBG01639 CBG01639 CBG25061 CBG25061 CBG09829 CBG09829 kin-32 kin-32 frm-4 frm-4 erm-1 erm-1 maa-1 maa-1 CBG13772 CBG13772 frm-3 frm-3 acbp-3 acbp-3 acbp-5 acbp-5 acbp-7 acbp-7 frm-8 frm-8 acbp-6.1 acbp-6.1 nfm-1 nfm-1 acbp-1 acbp-1 CBG22314 CBG22314 acbp-6.2 acbp-6.2 acbp-4.1 acbp-4.1 hum-6 hum-6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tln-1Protein CBG22153. (1036 aa)
ptp-1Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (1024 aa)
max-1.1Protein CBG09439. (1217 aa)
max-1.2Protein CBR-MAX-1. (1104 aa)
frm-2Protein CBR-FRM-2. (590 aa)
frm-1Protein CBR-FRM-1. (6473 aa)
frm-10Protein CBR-FRM-10. (533 aa)
ech-4Protein CBR-ECH-4. (385 aa)
CBG01639Protein CBG01639. (1579 aa)
CBG25061Protein CBG25061. (76 aa)
CBG09829Protein CBG09829. (143 aa)
kin-32Protein CBR-KIN-32; Belongs to the protein kinase superfamily. Tyr protein kinase family. (865 aa)
frm-4Protein CBR-FRM-4. (706 aa)
erm-1Protein CBR-ERM-1. (563 aa)
maa-1Protein CBR-MAA-1. (280 aa)
CBG13772Protein CBG13772. (449 aa)
frm-3Protein CBR-FRM-3. (1109 aa)
acbp-3Protein CBR-ACBP-3. (116 aa)
acbp-5Protein CBR-ACBP-5; Belongs to the BolA/IbaG family. (385 aa)
acbp-7Protein CBR-ACBP-7. (224 aa)
frm-8Protein CBR-FRM-8. (788 aa)
acbp-6.1Protein CBG21028. (115 aa)
nfm-1Protein CBR-NFM-1. (690 aa)
acbp-1Protein CBR-ACBP-1. (86 aa)
CBG22314Protein CBG22314. (650 aa)
acbp-6.2Protein CBR-ACBP-6. (51 aa)
acbp-4.1Protein CBR-ACBP-4.1. (146 aa)
hum-6Unconventional myosin heavy chain 6; Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments (By similarity). Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2099 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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