(12 nodes) Peptidase M1, membrane alanine aminopeptidase network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG08739	Protein CBG08739. (1172 aa)
	CBG03367	Protein CBG03367. (1164 aa)
	ltah-1.1	Protein CBG06268. (624 aa)
	pam-1	Aminopeptidase. (899 aa)
	ltah-1.2	Protein CBG08301. (625 aa)
	taf-2	Protein CBR-TAF-2. (1090 aa)
	CBG09621	Protein CBG09621. (1099 aa)
	CBG09516	Aminopeptidase. (855 aa)
	anp-1	Aminopeptidase. (991 aa)
	CBG09901	Protein CBG09901. (2006 aa)
	CBG19917	Protein CBG19917. (640 aa)
	CBG23083	Protein CBG23083. (646 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG09516	CBG19917	A8X8X5	A8XWQ8	Aminopeptidase.	Protein CBG19917.	0.400
CBG09621	ltah-1.1	A8X8M9	A8X0H7	Protein CBG09621.	Protein CBG06268.	0.663
CBG09621	ltah-1.2	A8X8M9	A8X691	Protein CBG09621.	Protein CBG08301.	0.420
CBG19917	CBG09516	A8XWQ8	A8X8X5	Protein CBG19917.	Aminopeptidase.	0.400
CBG19917	CBG23083	A8XWQ8	A8Y4R4	Protein CBG19917.	Protein CBG23083.	0.582
CBG19917	pam-1	A8XWQ8	A8X1D5	Protein CBG19917.	Aminopeptidase.	0.420
CBG23083	CBG19917	A8Y4R4	A8XWQ8	Protein CBG23083.	Protein CBG19917.	0.582
ltah-1.1	CBG09621	A8X0H7	A8X8M9	Protein CBG06268.	Protein CBG09621.	0.663
ltah-1.1	ltah-1.2	A8X0H7	A8X691	Protein CBG06268.	Protein CBG08301.	0.903
ltah-1.2	CBG09621	A8X691	A8X8M9	Protein CBG08301.	Protein CBG09621.	0.420
ltah-1.2	ltah-1.1	A8X691	A8X0H7	Protein CBG08301.	Protein CBG06268.	0.903
pam-1	CBG19917	A8X1D5	A8XWQ8	Aminopeptidase.	Protein CBG19917.	0.420