(17 nodes) Zinc finger, FYVE-related network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	eea-1	Protein CBR-EEA-1. (1221 aa)
	exc-5	Protein CBR-EXC-5. (859 aa)
	hgrs-1	Protein CBR-HGRS-1. (728 aa)
	rabs-5	Protein CBR-RABS-5. (558 aa)
	wdfy-3	Protein CBG03484. (3387 aa)
	CBG08497	Protein CBG08497. (339 aa)
	CBG08571	Protein CBG08571. (395 aa)
	rabn-5	Protein CBR-RABN-5. (413 aa)
	mtm-3	Protein CBR-MTM-3. (1008 aa)
	CBG10230	Protein CBG10230. (713 aa)
	unc-10	Protein CBR-UNC-10. (1636 aa)
	aka-1	Protein CBR-AKA-1. (1337 aa)
	lst-2	Lateral signaling target protein 2; Negative regulator of epidermal growth factor receptor (EGFR) signaling. (651 aa)
	Cbr-tag-77	Protein CBR-TAG-77. (1010 aa)
	rbf-1	Protein CBR-RBF-1. (1021 aa)
	ppk-3	Protein CBR-PPK-3. (1494 aa)
	wdfy-2	WD repeat and FYVE domain-containing protein 2; Plays a role in coelomocyte endocytosis. (417 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG08497	unc-10	A8X6Q0	A8XC13	Protein CBG08497.	Protein CBR-UNC-10.	0.614
CBG10230	exc-5	A8XAT2	A8WJW3	Protein CBG10230.	Protein CBR-EXC-5.	0.542
CBG10230	rabn-5	A8XAT2	A8X7V8	Protein CBG10230.	Protein CBR-RABN-5.	0.545
CBG10230	wdfy-2	A8XAT2	A8XXC7	Protein CBG10230.	WD repeat and FYVE domain-containing protein 2; Plays a role in coelomocyte endocytosis.	0.546
Cbr-tag-77	exc-5	A8XMF0	A8WJW3	Protein CBR-TAG-77.	Protein CBR-EXC-5.	0.651
Cbr-tag-77	rabn-5	A8XMF0	A8X7V8	Protein CBR-TAG-77.	Protein CBR-RABN-5.	0.653
Cbr-tag-77	wdfy-2	A8XMF0	A8XXC7	Protein CBR-TAG-77.	WD repeat and FYVE domain-containing protein 2; Plays a role in coelomocyte endocytosis.	0.654
aka-1	rabn-5	A8XGZ1	A8X7V8	Protein CBR-AKA-1.	Protein CBR-RABN-5.	0.579
aka-1	wdfy-2	A8XGZ1	A8XXC7	Protein CBR-AKA-1.	WD repeat and FYVE domain-containing protein 2; Plays a role in coelomocyte endocytosis.	0.603
eea-1	exc-5	A8X2V3	A8WJW3	Protein CBR-EEA-1.	Protein CBR-EXC-5.	0.509
eea-1	rabn-5	A8X2V3	A8X7V8	Protein CBR-EEA-1.	Protein CBR-RABN-5.	0.630
exc-5	CBG10230	A8WJW3	A8XAT2	Protein CBR-EXC-5.	Protein CBG10230.	0.542
exc-5	Cbr-tag-77	A8WJW3	A8XMF0	Protein CBR-EXC-5.	Protein CBR-TAG-77.	0.651
exc-5	eea-1	A8WJW3	A8X2V3	Protein CBR-EXC-5.	Protein CBR-EEA-1.	0.509
hgrs-1	rabs-5	A8WRC9	A8WRE9	Protein CBR-HGRS-1.	Protein CBR-RABS-5.	0.558
mtm-3	ppk-3	A8X8A8	A8XQ22	Protein CBR-MTM-3.	Protein CBR-PPK-3.	0.627
ppk-3	mtm-3	A8XQ22	A8X8A8	Protein CBR-PPK-3.	Protein CBR-MTM-3.	0.627
ppk-3	rabs-5	A8XQ22	A8WRE9	Protein CBR-PPK-3.	Protein CBR-RABS-5.	0.449
rabn-5	CBG10230	A8X7V8	A8XAT2	Protein CBR-RABN-5.	Protein CBG10230.	0.545
rabn-5	Cbr-tag-77	A8X7V8	A8XMF0	Protein CBR-RABN-5.	Protein CBR-TAG-77.	0.653