(37 nodes) Mitochondrial carrier domain superfamily network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBG00135	Probable calcium-binding mitochondrial carrier CBG00135; Calcium-dependent mitochondrial solute carrier. Belongs to the mitochondrial carrier (TC 2.A.29) family. (532 aa)
	slc-25a32	Protein CBG00670; Belongs to the mitochondrial carrier (TC 2.A.29) family. (296 aa)
	CBG02742	Protein CBG02742; Belongs to the mitochondrial carrier (TC 2.A.29) family. (382 aa)
	CBG03436	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family. (306 aa)
	Cbr-tag-316	Protein CBR-TAG-316; Belongs to the mitochondrial carrier (TC 2.A.29) family. (318 aa)
	CBG03753	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family. (400 aa)
	slc-25a29	Protein CBG04567; Belongs to the mitochondrial carrier (TC 2.A.29) family. (359 aa)
	hpo-12	Protein CBR-HPO-12; Belongs to the mitochondrial carrier (TC 2.A.29) family. (648 aa)
	CBG06020	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family. (340 aa)
	dif-1	Protein CBR-DIF-1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)
	slc-25a18.2	Protein CBG05880; Belongs to the mitochondrial carrier (TC 2.A.29) family. (309 aa)
	misc-1	Protein CBG07018; Belongs to the mitochondrial carrier (TC 2.A.29) family. (307 aa)
	slc-25a18.1	Protein CBG07647; Belongs to the mitochondrial carrier (TC 2.A.29) family. (316 aa)
	CBG07280	Protein CBG07280; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)
	slc-25a46	Protein CBG08013; Belongs to the mitochondrial carrier (TC 2.A.29) family. (494 aa)
	CBG09342	Protein CBG09342; Belongs to the mitochondrial carrier (TC 2.A.29) family. (284 aa)
	CBG09959	Protein CBG09959; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)
	CBG10209	Protein CBG10209; Belongs to the mitochondrial carrier (TC 2.A.29) family. (415 aa)
	slc-25a10	Protein CBG10876; Belongs to the mitochondrial carrier (TC 2.A.29) family. (292 aa)
	slc-25a42	Protein CBG12501; Belongs to the mitochondrial carrier (TC 2.A.29) family. (294 aa)
	mtch-1	Protein CBR-MTCH-1. (334 aa)
	slc-25a21	Protein CBG16392; Belongs to the mitochondrial carrier (TC 2.A.29) family. (285 aa)
	CBG17210	Protein CBG17210; Belongs to the mitochondrial carrier (TC 2.A.29) family. (297 aa)
	CBG17655	Protein CBG17655; Belongs to the mitochondrial carrier (TC 2.A.29) family. (336 aa)
	ucp-4	Protein CBR-UCP-4; Belongs to the mitochondrial carrier (TC 2.A.29) family. (324 aa)
	CBG20158	Protein CBG20158; Belongs to the mitochondrial carrier (TC 2.A.29) family. (365 aa)
	ant-1.2	Protein CBG20451; Belongs to the mitochondrial carrier (TC 2.A.29) family. (216 aa)
	ant-1.1	Protein CBR-TAG-61; Belongs to the mitochondrial carrier (TC 2.A.29) family. (300 aa)
	CBG24187	Protein CBG24187; Belongs to the mitochondrial carrier (TC 2.A.29) family. (690 aa)
	CBG21322	Protein CBG21322; Belongs to the mitochondrial carrier (TC 2.A.29) family. (301 aa)
	slc-25a26	Protein CBG21724; Belongs to the mitochondrial carrier (TC 2.A.29) family. (271 aa)
	CBG21695	Protein CBG21695; Belongs to the mitochondrial carrier (TC 2.A.29) family. (269 aa)
	CBG21892	Protein CBG21892; Belongs to the mitochondrial carrier (TC 2.A.29) family. (368 aa)
	CBG23535	Protein CBG23535; Belongs to the mitochondrial carrier (TC 2.A.29) family. (340 aa)
	CBG23372	Protein CBG23372; Belongs to the mitochondrial carrier (TC 2.A.29) family. (285 aa)
	bus-18	Protein CBR-BUS-18; Belongs to the mitochondrial carrier (TC 2.A.29) family. (834 aa)
	mfn-1	Mitoferrin; Mitochondrial iron transporter that mediates iron uptake. Probably required for heme synthesis of hemoproteins and Fe-S cluster assembly; Belongs to the mitochondrial carrier (TC 2.A.29) family. (311 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG02742	CBG21695	A8WTL8	A8Y0Q2	Protein CBG02742; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG21695; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.404
CBG02742	mfn-1	A8WTL8	Q620A6	Protein CBG02742; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Mitoferrin; Mitochondrial iron transporter that mediates iron uptake. Probably required for heme synthesis of hemoproteins and Fe-S cluster assembly; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.424
CBG03436	CBG03753	A8WV23	A8WWM6	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03436	CBG06020	A8WV23	A8X132	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03436	CBG07280	A8WV23	A8X530	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG07280; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.413
CBG03436	CBG09959	A8WV23	A8XA18	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG09959; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.413
CBG03436	CBG10209	A8WV23	A8XAU9	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG10209; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.413
CBG03436	CBG23535	A8WV23	A8Y3P7	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG23535; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03753	CBG03436	A8WWM6	A8WV23	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03753	CBG09342	A8WWM6	A8X9B7	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG09342; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.491
CBG03753	CBG17210	A8WWM6	A8XQJ8	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG17210; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03753	Cbr-tag-316	A8WWM6	A8WWJ8	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBR-TAG-316; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03753	ant-1.1	A8WWM6	A8XZM1	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBR-TAG-61; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG03753	ant-1.2	A8WWM6	A8XXT3	Protein CBG03753; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG20451; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG06020	CBG03436	A8X132	A8WV23	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG03436; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG06020	CBG09342	A8X132	A8X9B7	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG09342; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.491
CBG06020	CBG17210	A8X132	A8XQJ8	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG17210; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG06020	Cbr-tag-316	A8X132	A8WWJ8	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBR-TAG-316; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540
CBG06020	ant-1.1	A8X132	A8XZM1	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBR-TAG-61; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.544
CBG06020	ant-1.2	A8X132	A8XXT3	Protein CBG06020; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein CBG20451; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.540