(43 nodes) Periplasmic binding protein-like I network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gcy-22	Guanylate cyclase. (1076 aa)
	CBG06559	Guanylate cyclase. (1291 aa)
	gcy-11	Guanylate cyclase. (1097 aa)
	CBG15092	Protein CBG15092. (226 aa)
	CBG15091	Protein CBG15091. (267 aa)
	gcy-28	Guanylate cyclase. (1264 aa)
	CBG14864	Protein CBG14864. (305 aa)
	glr-4	Protein CBR-GLR-4. (1007 aa)
	nmr-2	Protein CBR-NMR-2. (1001 aa)
	gcy-7	Guanylate cyclase. (1124 aa)
	glr-6	Protein CBR-GLR-6. (844 aa)
	CBG10472	Protein CBG10472. (597 aa)
	Cbr-gcy-6	Guanylate cyclase. (1104 aa)
	Cbr-gcy-1	Guanylate cyclase. (957 aa)
	gcy-4	Receptor-type guanylate cyclase gcy-4; Guanylate cyclase involved in the production of the second messenger cGMP. Regulates chemotaxis responses toward salt ions in ASE sensory neurons (By similarity). (1135 aa)
	gcy-5	Guanylate cyclase. (1242 aa)
	glr-5	Protein CBR-GLR-5. (1149 aa)
	gbb-2	Protein CBG01699; Belongs to the G-protein coupled receptor 3 family. (738 aa)
	gcy-23	Guanylate cyclase. (1047 aa)
	CBG01593	Protein CBG01593; Belongs to the G-protein coupled receptor 3 family. (1395 aa)
	mgl-1	Protein CBR-MGL-1. (963 aa)
	gbb-1	Protein CBG02016. (933 aa)
	mgl-2	Protein CBR-MGL-2. (1083 aa)
	gcy-19	Receptor-type guanylate cyclase gcy-19; Guanylate cyclase involved in the production of the second messenger cGMP (By similarity). (1214 aa)
	glr-2	Protein CBR-GLR-2; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (967 aa)
	CBG16663	Protein CBG16663. (277 aa)
	gcy-25	Guanylate cyclase. (1066 aa)
	gcy-21	Guanylate cyclase. (1193 aa)
	glr-1	Protein CBR-GLR-1. (978 aa)
	gcy-18	Guanylate cyclase. (1145 aa)
	nmr-1	Protein CBR-NMR-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1064 aa)
	mgl-3	Protein CBR-MGL-3. (1046 aa)
	gcy-8	Guanylate cyclase. (1188 aa)
	gcy-9	Guanylate cyclase. (1156 aa)
	gcy-29	Guanylate cyclase. (1072 aa)
	glr-3	Protein CBR-GLR-3. (946 aa)
	gcy-13	Guanylate cyclase. (1066 aa)
	CBG07424	Protein CBG07424. (395 aa)
	daf-11	Guanylate cyclase. (1277 aa)
	CBG25458	Guanylate cyclase. (1148 aa)
	gcy-12	Guanylate cyclase. (1690 aa)
	gcy-17	Guanylate cyclase. (1095 aa)
	gcy-14	Guanylate cyclase. (1125 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG01593	gbb-1	A8WRA6	A8WRT5	Protein CBG01593; Belongs to the G-protein coupled receptor 3 family.	Protein CBG02016.	0.526
CBG01593	gbb-2	A8WRA6	A8WR21	Protein CBG01593; Belongs to the G-protein coupled receptor 3 family.	Protein CBG01699; Belongs to the G-protein coupled receptor 3 family.	0.526
gbb-1	CBG01593	A8WRT5	A8WRA6	Protein CBG02016.	Protein CBG01593; Belongs to the G-protein coupled receptor 3 family.	0.526
gbb-1	gbb-2	A8WRT5	A8WR21	Protein CBG02016.	Protein CBG01699; Belongs to the G-protein coupled receptor 3 family.	0.966
gbb-1	mgl-1	A8WRT5	A8WRN3	Protein CBG02016.	Protein CBR-MGL-1.	0.553
gbb-1	mgl-2	A8WRT5	A8WSB1	Protein CBG02016.	Protein CBR-MGL-2.	0.553
gbb-1	mgl-3	A8WRT5	A8XWS2	Protein CBG02016.	Protein CBR-MGL-3.	0.553
gbb-2	CBG01593	A8WR21	A8WRA6	Protein CBG01699; Belongs to the G-protein coupled receptor 3 family.	Protein CBG01593; Belongs to the G-protein coupled receptor 3 family.	0.526
gbb-2	gbb-1	A8WR21	A8WRT5	Protein CBG01699; Belongs to the G-protein coupled receptor 3 family.	Protein CBG02016.	0.966
gbb-2	mgl-1	A8WR21	A8WRN3	Protein CBG01699; Belongs to the G-protein coupled receptor 3 family.	Protein CBR-MGL-1.	0.553
gbb-2	mgl-2	A8WR21	A8WSB1	Protein CBG01699; Belongs to the G-protein coupled receptor 3 family.	Protein CBR-MGL-2.	0.553
gbb-2	mgl-3	A8WR21	A8XWS2	Protein CBG01699; Belongs to the G-protein coupled receptor 3 family.	Protein CBR-MGL-3.	0.553
gcy-13	nmr-1	A8Y3U7	A8WUE7	Guanylate cyclase.	Protein CBR-NMR-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.643
gcy-18	glr-3	A8WKK2	A8Y177	Guanylate cyclase.	Protein CBR-GLR-3.	0.481
gcy-23	glr-3	A8WR74	A8Y177	Guanylate cyclase.	Protein CBR-GLR-3.	0.480
gcy-8	glr-3	A8XRG7	A8Y177	Guanylate cyclase.	Protein CBR-GLR-3.	0.620
glr-1	glr-2	A8XT20	A8XPK4	Protein CBR-GLR-1.	Protein CBR-GLR-2; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.961
glr-1	glr-5	A8XT20	A8WQG6	Protein CBR-GLR-1.	Protein CBR-GLR-5.	0.601
glr-1	mgl-2	A8XT20	A8WSB1	Protein CBR-GLR-1.	Protein CBR-MGL-2.	0.643
glr-1	nmr-1	A8XT20	A8WUE7	Protein CBR-GLR-1.	Protein CBR-NMR-1; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.763