STRINGSTRING
asp-5 asp-5 CBG01307 CBG01307 CBG01308 CBG01308 CBG01356 CBG01356 asp-13 asp-13 asp-14 asp-14 asp-9 asp-9 hrg-7 hrg-7 CBG11306 CBG11306 asp-6 asp-6 CBG11304 CBG11304 CBG11302 CBG11302 CBG16997 CBG16997 asp-2 asp-2 asp-1 asp-1 CBG20332 CBG20332
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
asp-5Protein CBR-ASP-5; Belongs to the peptidase A1 family. (394 aa)
CBG01307Protein CBG01307; Belongs to the peptidase A1 family. (389 aa)
CBG01308Protein CBG01308; Belongs to the peptidase A1 family. (389 aa)
CBG01356Protein CBG01356; Belongs to the peptidase A1 family. (332 aa)
asp-13Protein CBG01462; Belongs to the peptidase A1 family. (387 aa)
asp-14Protein CBG05064; Belongs to the peptidase A1 family. (367 aa)
asp-9Protein CBG05505; Belongs to the peptidase A1 family. (396 aa)
hrg-7Protein CBG08575; Belongs to the peptidase A1 family. (428 aa)
CBG11306Protein CBG11306; Belongs to the peptidase A1 family. (370 aa)
asp-6Protein CBR-ASP-6; Belongs to the peptidase A1 family. (389 aa)
CBG11304Protein CBG11304; Belongs to the peptidase A1 family. (395 aa)
CBG11302Protein CBG11302; Belongs to the peptidase A1 family. (263 aa)
CBG16997Protein CBG16997; Belongs to the peptidase A1 family. (428 aa)
asp-2Protein CBR-ASP-2; Belongs to the peptidase A1 family. (704 aa)
asp-1Protein CBR-ASP-1; Belongs to the peptidase A1 family. (393 aa)
CBG20332Protein CBG20332; Belongs to the peptidase A1 family. (385 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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