STRINGSTRING
rig-4 rig-4 rol-3 rol-3 cle-1 cle-1 madd-2 madd-2 CBG01939 CBG01939 dep-1 dep-1 CBG03226 CBG03226 ptp-3 ptp-3 clr-1 clr-1 igdb-2 igdb-2 lad-2 lad-2 ndnf-1 ndnf-1 ptp-4 ptp-4 CBG04582 CBG04582 igcm-2 igcm-2 igdb-3 igdb-3 unc-22 unc-22 syg-2 syg-2 igcm-1 igcm-1 ncam-1 ncam-1 Cbr-ttn-1 Cbr-ttn-1 CBG09244 CBG09244 let-805 let-805 twk-32 twk-32 CBG11546 CBG11546 CBG12069 CBG12069 unc-89 unc-89 twk-30 twk-30 vab-1 vab-1 jac-1 jac-1 sax-3 sax-3 CBG14320 CBG14320 CBG14788 CBG14788 unc-40 unc-40 rimb-1 rimb-1 rig-1 rig-1 daf-2 daf-2 dig-1.1 dig-1.1 CBG17392 CBG17392 hcf-1 hcf-1 kal-1 kal-1 rig-6 rig-6 Cbr-sax-7 Cbr-sax-7 CBG21718 CBG21718 CBG24788 CBG24788
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rig-4Protein sidekick homolog; Cell adhesion protein; Belongs to the sidekick family. (2322 aa)
rol-3Protein roller-3; Involved in larval development and locomotion. (2439 aa)
cle-1Protein CBR-CLE-1, isoform b. (1292 aa)
madd-2Protein CBR-TRIM-9. (768 aa)
CBG01939Protein CBG01939. (680 aa)
dep-1Protein CBR-DEP-1. (1385 aa)
CBG03226Protein CBG03226. (889 aa)
ptp-3Protein CBR-PTP-3. (1462 aa)
clr-1Protein CBR-CLR-1. (1471 aa)
igdb-2Protein CBG03342. (1255 aa)
lad-2Protein CBR-LAD-2. (1216 aa)
ndnf-1Protein CBR-NDNF-1. (536 aa)
ptp-4Protein CBG03399. (1247 aa)
CBG04582Protein CBG04582. (683 aa)
igcm-2Protein CBR-IGCM-2. (757 aa)
igdb-3Protein CBG05054. (533 aa)
unc-22Protein CBR-UNC-22. (7455 aa)
syg-2Protein CBR-SYG-2. (1270 aa)
igcm-1Protein CBR-IGCM-1. (1145 aa)
ncam-1Protein CBR-NCAM-1. (965 aa)
Cbr-ttn-1Protein CBR-TTN-1. (2897 aa)
CBG09244Protein CBG09244. (3376 aa)
let-805Protein CBR-LET-805. (4544 aa)
twk-32Protein CBR-TWK-32; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (629 aa)
CBG11546Protein CBG11546. (330 aa)
CBG12069Protein CBG12069. (1567 aa)
unc-89Protein CBR-UNC-89. (6561 aa)
twk-30Protein CBR-TWK-30; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (643 aa)
vab-1Protein CBR-VAB-1. (1118 aa)
jac-1Protein CBR-JAC-1. (1296 aa)
sax-3Protein CBR-SAX-3. (1295 aa)
CBG14320Protein CBG14320. (483 aa)
CBG14788Protein CBG14788. (403 aa)
unc-40Protein CBR-UNC-40. (1407 aa)
rimb-1Protein CBR-TAG-168. (1337 aa)
rig-1Protein CBR-RIG-1. (1170 aa)
daf-2Protein CBR-DAF-2. (1840 aa)
dig-1.1Protein CBR-DIG-1. (13580 aa)
CBG17392Protein CBG17392. (1745 aa)
hcf-1Protein CBR-HCF-1. (771 aa)
kal-1Protein CBR-KAL-1. (711 aa)
rig-6Protein CBR-RIG-6. (1297 aa)
Cbr-sax-7Protein CBR-SAX-7. (1402 aa)
CBG21718Protein CBG21718. (1544 aa)
CBG24788Protein CBG24788. (1096 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
Server load: low (18%) [HD]