(77 nodes) Immunoglobulin-like domain superfamily network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	oig-3	Protein CBR-OIG-3. (151 aa)
	pxn-1	Peroxidasin homolog; Belongs to the peroxidase family. XPO subfamily. (1288 aa)
	igeg-1	Protein CBG01840. (270 aa)
	igcm-3	Protein CBR-IGCM-3. (589 aa)
	syg-1	Protein CBR-SYG-1. (746 aa)
	igcm-4	Protein CBG02173. (539 aa)
	oig-2	Protein CBR-OIG-2. (108 aa)
	zig-10	Protein CBG02647. (320 aa)
	clr-1	Protein CBR-CLR-1. (1471 aa)
	CBG03341	Protein CBG03341. (314 aa)
	igdb-2	Protein CBG03342. (1255 aa)
	lad-2	Protein CBR-LAD-2. (1216 aa)
	ptp-4	Protein CBG03399. (1247 aa)
	rig-5	Protein CBR-RIG-5. (409 aa)
	zig-1	Protein CBR-ZIG-1. (265 aa)
	igcm-2	Protein CBR-IGCM-2. (757 aa)
	igdb-3	Protein CBG05054. (533 aa)
	unc-22	Protein CBR-UNC-22. (7455 aa)
	ketn-1	Protein CBR-KETN-1. (5060 aa)
	syg-2	Protein CBR-SYG-2. (1270 aa)
	CBG07284	Protein CBG07284. (251 aa)
	igcm-1	Protein CBR-IGCM-1. (1145 aa)
	ncam-1	Protein CBR-NCAM-1. (965 aa)
	Cbr-ttn-1	Protein CBR-TTN-1. (2897 aa)
	CBG09244	Protein CBG09244. (3376 aa)
	ugt-45	Protein CBR-UGT-45. (990 aa)
	rig-3	Protein CBR-RIG-3. (531 aa)
	unc-52	Protein CBR-UNC-52. (2481 aa)
	CBG11065	Protein CBG11065. (823 aa)
	malt-1	Protein CBG11191. (638 aa)
	oig-1	Protein CBR-OIG-1. (85 aa)
	CBG12069	Protein CBG12069. (1567 aa)
	unc-89	Protein CBR-UNC-89. (6561 aa)
	CBG12078	Protein CBG12078. (812 aa)
	madd-4	Protein CBR-MADD-4. (1042 aa)
	oig-4	Protein CBR-OIG-4. (155 aa)
	CBG13762	Protein CBG13762. (137 aa)
	sax-3	Protein CBR-SAX-3. (1295 aa)
	zig-6	Protein CBR-ZIG-6. (239 aa)
	zig-9	Protein CBG14880. (281 aa)
	unc-40	Protein CBR-UNC-40. (1407 aa)
	CBG15339	Protein CBG15339. (331 aa)
	CBG15514	Protein CBG15514. (232 aa)
	zig-12	Protein CBG15443. (197 aa)
	rig-1	Protein CBR-RIG-1. (1170 aa)
	him-4	Protein CBR-HIM-4. (2899 aa)
	CBG16014	Protein CBG16014. (2753 aa)
	mrps-18a	Protein CBR-MRPS-18A. (945 aa)
	dig-1.1	Protein CBR-DIG-1. (13580 aa)
	zig-4	Protein CBR-ZIG-4. (250 aa)
	zig-3	Protein CBR-ZIG-3. (244 aa)
	CBG16886	Protein CBG16886. (324 aa)
	Cbr-dim-1	Protein CBR-DIM-1. (324 aa)
	igeg-2	Protein CBG17334. (260 aa)
	CBG17535	Receptor protein-tyrosine kinase. (1447 aa)
	ver-3	Protein CBR-VER-3. (1313 aa)
	pxn-2	Protein CBR-PXN-2. (1366 aa)
	egl-15	Receptor protein-tyrosine kinase. (1192 aa)
	zig-5	Protein CBR-ZIG-5. (255 aa)
	CBG18884	Protein CBG18884. (1793 aa)
	CBG19196	Protein CBG19196. (2696 aa)
	unc-5	Protein CBR-UNC-5. (922 aa)
	cam-1	Protein CBR-CAM-1. (916 aa)
	zig-8	Protein CBR-ZIG-8. (224 aa)
	mig-6	Protein CBR-MIG-6. (2157 aa)
	rig-6	Protein CBR-RIG-6. (1297 aa)
	zig-11	Protein CBG21818. (306 aa)
	iglr-3	Protein CBG22037. (496 aa)
	sma-10	Protein CBG22529. (879 aa)
	wrk-1	Protein CBR-WRK-1. (576 aa)
	CBG21718	Protein CBG21718. (1544 aa)
	CBG26383	Protein CBG26383. (359 aa)
	CBG18883	Protein CBG18883. (2598 aa)
	CBG24158	Protein CBG24158. (107 aa)
	Cbr-sax-7	Protein CBR-SAX-7. (1402 aa)
	mab-20	Semaphorin-2A; Regulates the formation or stabilization of cell-cell contacts at several stages of epithelial morphogenesis. In early embryonic development, required for proper ventral closure of the epidermis. During male tail morphogenesis, regulates precursor cell sorting and allows the formation of distinct sensory rays. Seems to control cell-cell contact formation through 2 parallel pathways, one involving efn-4 and one involving plx-2 and unc-129. Involved in axon guidance. Probably by binding receptor plx-2, regulates fln-1-mediated remodeling of the actin cytoskeleton and thus [...] (656 aa)
	rig-4	Protein sidekick homolog; Cell adhesion protein; Belongs to the sidekick family. (2322 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG03341	CBG12069	A8WUT8	A8XEH4	Protein CBG03341.	Protein CBG12069.	0.543
CBG03341	CBG26383	A8WUT8	B6IFE2	Protein CBG03341.	Protein CBG26383.	0.642
CBG03341	cam-1	A8WUT8	A8XXB9	Protein CBG03341.	Protein CBR-CAM-1.	0.412
CBG03341	igcm-3	A8WUT8	A8WRW8	Protein CBG03341.	Protein CBR-IGCM-3.	0.635
CBG03341	igeg-1	A8WUT8	A8WQP1	Protein CBG03341.	Protein CBG01840.	0.683
CBG03341	ptp-4	A8WUT8	A8WUY8	Protein CBG03341.	Protein CBG03399.	0.673
CBG03341	unc-89	A8WUT8	A8XEH5	Protein CBG03341.	Protein CBR-UNC-89.	0.543
CBG03341	zig-11	A8WUT8	A8Y0W1	Protein CBG03341.	Protein CBG21818.	0.640
CBG07284	CBG16886	A8X528	A8XQ01	Protein CBG07284.	Protein CBG16886.	0.405
CBG07284	Cbr-dim-1	A8X528	A8XQ02	Protein CBG07284.	Protein CBR-DIM-1.	0.408
CBG07284	Cbr-sax-7	A8X528	H8WH61	Protein CBG07284.	Protein CBR-SAX-7.	0.403
CBG07284	zig-1	A8X528	A8WWW0	Protein CBG07284.	Protein CBR-ZIG-1.	0.408
CBG09244	CBG18884	A8X9J5	A8XUA1	Protein CBG09244.	Protein CBG18884.	0.490
CBG12069	CBG03341	A8XEH4	A8WUT8	Protein CBG12069.	Protein CBG03341.	0.543
CBG12069	cam-1	A8XEH4	A8XXB9	Protein CBG12069.	Protein CBR-CAM-1.	0.616
CBG12069	igcm-1	A8XEH4	A8X5T7	Protein CBG12069.	Protein CBR-IGCM-1.	0.435
CBG12069	igdb-2	A8XEH4	A8WUT9	Protein CBG12069.	Protein CBG03342.	0.543
CBG12069	iglr-3	A8XEH4	A8Y1E1	Protein CBG12069.	Protein CBG22037.	0.455
CBG12069	mrps-18a	A8XEH4	A8XP65	Protein CBG12069.	Protein CBR-MRPS-18A.	0.455
CBG12069	pxn-1	A8XEH4	A8WQH2	Protein CBG12069.	Peroxidasin homolog; Belongs to the peroxidase family. XPO subfamily.	0.497