STRINGSTRING
elt-3 elt-3 elt-7 elt-7 end-1 end-1 end-3.1 end-3.1 end-3.2 end-3.2 egl-18 egl-18 elt-6 elt-6 elt-2 elt-2 elt-1 elt-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
elt-3Protein CBR-ELT-3. (304 aa)
elt-7Protein CBR-ELT-7. (195 aa)
end-1Protein CBR-END-1. (210 aa)
end-3.1Protein CBR-END-3. (253 aa)
end-3.2Protein CBG11404. (248 aa)
egl-18Protein CBR-EGL-18. (419 aa)
elt-6Protein CBR-ELT-6. (405 aa)
elt-2Protein CBR-ELT-2. (445 aa)
elt-1Protein CBR-ELT-1. (428 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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