STRINGSTRING
dnj-14 dnj-14 glna-3 glna-3 lin-2 lin-2 CBG00476 CBG00476 cho-1 cho-1 gta-1 gta-1 CBG03527 CBG03527 glna-1 glna-1 syd-2 syd-2 CBG05207 CBG05207 CBG05208 CBG05208 cpx-2 cpx-2 CBG05923 CBG05923 cla-1 cla-1 CBG05921 CBG05921 CBG07992 CBG07992 snn-1 snn-1 CBG09610 CBG09610 unc-47 unc-47 unc-10 unc-10 lin-7 lin-7 unc-13 unc-13 Cbr-unc-13 Cbr-unc-13 CBG13138 CBG13138 glna-2 glna-2 rimb-1 rimb-1 Cbr-snb-7 Cbr-snb-7 CBG17418 CBG17418 CBG19965 CBG19965 alh-7 alh-7 praf-3 praf-3 urm-1 urm-1 lin-10 lin-10 cpx-1 cpx-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnj-14Protein CBR-DNJ-14. (224 aa)
glna-3Protein CBR-GLNA-3. (600 aa)
lin-2Protein CBR-LIN-2; Belongs to the MAGUK family. (1009 aa)
CBG00476Protein CBG00476; Belongs to the acid ceramidase family. (351 aa)
cho-1Protein CBR-CHO-1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (570 aa)
gta-1Protein CBR-GTA-1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (483 aa)
CBG03527Protein CBG03527. (466 aa)
glna-1Protein CBR-GLNA-1. (825 aa)
syd-2Protein CBR-SYD-2. (1152 aa)
CBG05207Protein CBG05207. (517 aa)
CBG05208Protein CBG05208. (499 aa)
cpx-2Protein CBR-CPX-2. (145 aa)
CBG05923Protein CBG05923. (1233 aa)
cla-1Protein CBR-TAG-199. (2352 aa)
CBG05921Protein CBG05921. (299 aa)
CBG07992Protein CBG07992. (505 aa)
snn-1Protein CBR-SNN-1. (448 aa)
CBG09610Protein CBG09610. (842 aa)
unc-47Protein CBR-UNC-47. (484 aa)
unc-10Protein CBR-UNC-10. (1636 aa)
lin-7Protein CBR-LIN-7. (316 aa)
unc-13Protein CBR-UNC-13. (2250 aa)
Cbr-unc-13Protein CBG11945. (394 aa)
CBG13138Protein CBG13138. (496 aa)
glna-2Protein CBR-GLNA-2. (662 aa)
rimb-1Protein CBR-TAG-168. (1337 aa)
Cbr-snb-7Protein CBR-SNB-7. (101 aa)
CBG17418Protein CBG17418. (2818 aa)
CBG19965Protein CBG19965. (486 aa)
alh-7Protein CBR-ALH-7; Belongs to the aldehyde dehydrogenase family. (499 aa)
praf-3PRA1 family protein. (189 aa)
urm-1Ubiquitin-related modifier 1 homolog; Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by the MOCS3/UBA4 homolog. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxid [...] (101 aa)
lin-10Protein CBR-LIN-10, isoform a. (1120 aa)
cpx-1Putative complexin-1; Positively regulates a late step in synaptic vesicle exocytosis; Belongs to the complexin/synaphin family. (143 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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