(10 nodes) Triglyceride catabolism network (Caenorhabditis briggsae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hosl-1	Protein CBG14512. (828 aa)
	CBG11896	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (722 aa)
	lbp-6	Protein CBR-LBP-6; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (133 aa)
	CBG15159	Protein CBG15159. (368 aa)
	lbp-5	Protein CBR-LBP-5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (136 aa)
	CBG04552	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (676 aa)
	CBG09699	Protein CBG09699. (202 aa)
	lbp-7	Protein CBR-LBP-7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (137 aa)
	CBG11456	Protein CBG11456; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (137 aa)
	lbp-9	Protein CBR-LBP-9; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (137 aa)

Your Current Organism:

Caenorhabditis briggsae

NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBG09699	hosl-1	A8X8G8	A8XK33	Protein CBG09699.	Protein CBG14512.	0.690
CBG11456	hosl-1	A8XCZ2	A8XK33	Protein CBG11456; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Protein CBG14512.	0.414
CBG15159	hosl-1	A8XLT2	A8XK33	Protein CBG15159.	Protein CBG14512.	0.659
hosl-1	CBG09699	A8XK33	A8X8G8	Protein CBG14512.	Protein CBG09699.	0.690
hosl-1	CBG11456	A8XK33	A8XCZ2	Protein CBG14512.	Protein CBG11456; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.414
hosl-1	CBG15159	A8XK33	A8XLT2	Protein CBG14512.	Protein CBG15159.	0.659
hosl-1	lbp-5	A8XK33	A8XGE5	Protein CBG14512.	Protein CBR-LBP-5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.414
hosl-1	lbp-6	A8XK33	A8XGE4	Protein CBG14512.	Protein CBR-LBP-6; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.414
hosl-1	lbp-7	A8XK33	A8XCZ1	Protein CBG14512.	Protein CBR-LBP-7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.414
hosl-1	lbp-9	A8XK33	A8XEV7	Protein CBG14512.	Protein CBR-LBP-9; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	0.414
lbp-5	hosl-1	A8XGE5	A8XK33	Protein CBR-LBP-5; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Protein CBG14512.	0.414
lbp-6	hosl-1	A8XGE4	A8XK33	Protein CBR-LBP-6; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Protein CBG14512.	0.414
lbp-7	hosl-1	A8XCZ1	A8XK33	Protein CBR-LBP-7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Protein CBG14512.	0.414
lbp-9	hosl-1	A8XEV7	A8XK33	Protein CBR-LBP-9; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.	Protein CBG14512.	0.414