STRINGSTRING
CBG14442 CBG14442 CBG00206 CBG00206 ced-3 ced-3 CBG07411 CBG07411 akt-1 akt-1 lep-2 lep-2 cki-2 cki-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG14442Protein CBG14442. (396 aa)
CBG00206Protein CBG00206; Belongs to the protein kinase superfamily. (350 aa)
ced-3Protein CBR-CED-3; Belongs to the peptidase C14A family. (508 aa)
CBG07411Protein CBG07411. (201 aa)
akt-1Non-specific serine/threonine protein kinase. (605 aa)
lep-2Protein CBG13968. (435 aa)
cki-2Protein CBR-CKI-2.1. (256 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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