STRINGSTRING
ubc-9 ubc-9 CBG01718 CBG01718 CBG05231 CBG05231 CBG11828 CBG11828 CBG16850 CBG16850 smo-1 smo-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ubc-9Protein CBR-UBC-9; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
CBG01718Protein CBG01718. (382 aa)
CBG05231Protein CBG05231; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)
CBG11828Protein CBG11828. (55 aa)
CBG16850Protein CBG16850; Belongs to the ubiquitin-conjugating enzyme family. (203 aa)
smo-1Small ubiquitin-related modifier. (95 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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