STRINGSTRING
CBG01785 CBG01785 CBG01389 CBG01389 rpl-11.1 rpl-11.1 eif-2bepsilon eif-2bepsilon rpl-26 rpl-26 rpl-10 rpl-10 egl-45 egl-45 CBG25011 CBG25011 eif-3.G.1 eif-3.G.1 rps-3 rps-3 CBG23663 CBG23663 CBG23661 CBG23661 rps-9 rps-9 rpl-22 rpl-22 rps-23 rps-23 rpl-7 rpl-7 eif-3.I eif-3.I eif-3.H eif-3.H rpl-25.2 rpl-25.2 rps-19 rps-19 rpl-14 rpl-14 eif-3.C eif-3.C CBG03867 CBG03867 eif-2gamma eif-2gamma CBG04239 CBG04239 eif-3.B eif-3.B rpl-2 rpl-2 rpl-34 rpl-34 rps-11 rps-11 rps-5 rps-5 CBG05978 CBG05978 rps-8 rps-8 rps-4 rps-4 ife-3 ife-3 rps-27 rps-27 eif-3.D eif-3.D CBG06962 CBG06962 eif-3.L eif-3.L pab-2 pab-2 eif-3.j eif-3.j ife-2.1 ife-2.1 ife-2.2 ife-2.2 eif-2beta eif-2beta CBG08266 CBG08266 rpl-36 rpl-36 CBG08509 CBG08509 rpl-17 rpl-17 rpl-28 rpl-28 rps-20 rps-20 rpl-23 rpl-23 rps-12 rps-12 rpl-9 rpl-9 CBG09497 CBG09497 inx-7 inx-7 rps-25 rps-25 eif-2balpha eif-2balpha rps-16 rps-16 eif-1.a eif-1.a rps-22 rps-22 rpl-13 rpl-13 rpl-35 rpl-35 rps-15 rps-15 eif-3.E eif-3.E rpl-19 rpl-19 rps-17 rps-17 CBG12770 CBG12770 rpl-33 rpl-33 rps-24 rps-24 rps-28 rps-28 rps-6 rps-6 rpl-11.2 rpl-11.2 rpl-25.1 rpl-25.1 CBG14695 CBG14695 CBG14760 CBG14760 rps-29 rps-29 iffb-1 iffb-1 eif-2bbeta eif-2bbeta inf-1 inf-1 rpl-6 rpl-6 rpl-21 rpl-21 rps-2 rps-2 CBG18296 CBG18296 rps-0 rps-0 rps-1 rps-1 rpl-38 rpl-38 kxd-1 kxd-1 eif-2bdelta eif-2bdelta rps-13 rps-13 rpl-31 rpl-31 rps-26 rps-26 eif-3.f eif-3.f CBG20562 CBG20562 rpl-39 rpl-39 rpl-43 rpl-43 rpl-36.a rpl-36.a rpl-15 rpl-15 rps-7 rps-7 rps-18 rps-18 CBG21521 CBG21521 eif-2alpha eif-2alpha CBG22043 CBG22043 rla-1 rla-1 rpl-27 rpl-27 rpl-4 rpl-4 pqn-24 pqn-24 rpl-24.1 rpl-24.1 rps-10 rps-10 rpl-32 rpl-32 pab-1 pab-1 rpl-29 rpl-29 CBG22485 CBG22485 pqn-42 pqn-42 rpl-30 rpl-30 rla-0 rla-0 CBG02262 CBG02262 rpl-7a rpl-7a rpl-3 rpl-3 rpl-5 rpl-5 eif-3.K eif-3.K rps-21 rps-21 rpl-18 rpl-18 rpl-12 rpl-12 CBG25345 CBG25345 CBG26383 CBG26383 CBG25577 CBG25577 cif-1 cif-1 rpl-20 rpl-20 rla-2 rla-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG01785Protein CBG01785; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
CBG01389Protein CBG01389. (192 aa)
rpl-11.160S ribosomal protein L11-1; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...] (196 aa)
eif-2bepsilonProtein CBG00512. (665 aa)
rpl-26Protein CBR-RPL-26. (142 aa)
rpl-10Protein CBR-RPL-10. (214 aa)
egl-45Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1098 aa)
CBG25011Protein CBG25011. (82 aa)
eif-3.G.1Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (261 aa)
rps-3Protein CBR-RPS-3; Belongs to the universal ribosomal protein uS3 family. (247 aa)
CBG23663Protein CBG23663. (127 aa)
CBG23661Protein CBG23661. (255 aa)
rps-9Protein CBR-RPS-9; Belongs to the universal ribosomal protein uS4 family. (189 aa)
rpl-22Protein CBR-RPL-22. (130 aa)
rps-23Protein CBR-RPS-23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
rpl-7Protein CBR-RPL-7. (244 aa)
eif-3.IEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (327 aa)
eif-3.HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (365 aa)
rpl-25.2Protein CBR-RPL-25.2; Belongs to the universal ribosomal protein uL23 family. (146 aa)
rps-19Protein CBR-RPS-19. (146 aa)
rpl-14Protein CBR-RPL-14. (135 aa)
eif-3.CEukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (894 aa)
CBG03867Protein CBG03867. (186 aa)
eif-2gammaProtein CBG03884. (469 aa)
CBG04239Ribosomal protein L37; Binds to the 23S rRNA. (92 aa)
eif-3.BEukaryotic translation initiation factor 3 subunit B; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (716 aa)
rpl-2Protein CBR-RPL-2. (260 aa)
rpl-34Protein CBR-RPL-34. (110 aa)
rps-11Protein CBR-RPS-11; Belongs to the universal ribosomal protein uS17 family. (155 aa)
rps-5Protein CBR-RPS-5; Belongs to the universal ribosomal protein uS7 family. (210 aa)
CBG05978Protein CBG05978. (89 aa)
rps-840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
rps-440S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (259 aa)
ife-3Protein CBR-IFE-3; Belongs to the eukaryotic initiation factor 4E family. (242 aa)
rps-27Protein CBR-RPS-27. (83 aa)
eif-3.DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (574 aa)
CBG06962Protein CBG06962. (559 aa)
eif-3.LEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (537 aa)
pab-2Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (685 aa)
eif-3.jProtein CBG08014. (60 aa)
ife-2.1Protein CBR-IFE-2.1; Belongs to the eukaryotic initiation factor 4E family. (192 aa)
ife-2.2Protein CBR-IFE-2.2; Belongs to the eukaryotic initiation factor 4E family. (226 aa)
eif-2betaProtein CBR-IFTB-1. (250 aa)
CBG08266Protein CBG08266; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
rpl-3660S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (104 aa)
CBG08509Protein CBG08509. (240 aa)
rpl-17Protein CBR-RPL-17; Belongs to the universal ribosomal protein uL22 family. (186 aa)
rpl-28Protein CBR-RPL-28. (126 aa)
rps-20Protein CBR-RPS-20. (117 aa)
rpl-23Protein CBR-RPL-23; Belongs to the universal ribosomal protein uL14 family. (140 aa)
rps-1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (153 aa)
rpl-9Protein CBR-RPL-9. (189 aa)
CBG09497Protein CBG09497. (958 aa)
inx-7Innexin; Structural component of the gap junctions. Belongs to the pannexin family. (551 aa)
rps-2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (117 aa)
eif-2balphaProtein CBG10057; Belongs to the eIF-2B alpha/beta/delta subunits family. (305 aa)
rps-16Protein CBR-RPS-16; Belongs to the universal ribosomal protein uS9 family. (144 aa)
eif-1.aProtein CBG11654; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (215 aa)
rps-22Protein CBR-RPS-22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
rpl-1360S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (207 aa)
rpl-35Protein CBR-RPL-35. (123 aa)
rps-15Protein CBR-RPS-15; Belongs to the universal ribosomal protein uS19 family. (151 aa)
eif-3.EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (311 aa)
rpl-19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (198 aa)
rps-17Protein CBR-RPS-17. (130 aa)
CBG12770Protein CBG12770; Belongs to the eukaryotic ribosomal protein P1/P2 family. (108 aa)
rpl-33Protein CBR-RPL-33. (123 aa)
rps-24Protein CBR-RPS-24. (131 aa)
rps-28Protein CBR-RPS-28. (65 aa)
rps-640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (260 aa)
rpl-11.260S ribosomal protein L11-2; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome throu [...] (196 aa)
rpl-25.1Protein CBR-RPL-25.1; Belongs to the universal ribosomal protein uL23 family. (147 aa)
CBG14695Protein CBG14695. (1643 aa)
CBG14760Protein CBG14760. (343 aa)
rps-29Protein CBR-RPS-29. (138 aa)
iffb-1Protein CBR-IFFB-1. (1081 aa)
eif-2bbetaProtein CBG15840; Belongs to the eIF-2B alpha/beta/delta subunits family. (308 aa)
inf-1Protein CBR-INF-1; Belongs to the DEAD box helicase family. (402 aa)
rpl-660S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (217 aa)
rpl-21Protein CBR-RPL-21. (161 aa)
rps-2Protein CBR-RPS-2. (85 aa)
CBG18296Protein CBG18296; Belongs to the eukaryotic ribosomal protein P1/P2 family. (110 aa)
rps-040S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (278 aa)
rps-140S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (257 aa)
rpl-38Protein CBR-RPL-38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
kxd-1Protein CBG19105. (130 aa)
eif-2bdeltaProtein CBG19294; Belongs to the eIF-2B alpha/beta/delta subunits family. (552 aa)
rps-13Protein CBR-RPS-13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
rpl-31Protein CBR-RPL-31. (122 aa)
rps-2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (117 aa)
eif-3.fProtein CBR-EIF-3.F; Belongs to the eIF-3 subunit F family. (251 aa)
CBG20562Protein CBG20562. (441 aa)
rpl-39Protein CBR-RPL-39. (51 aa)
rpl-43Protein CBR-RPL-43. (91 aa)
rpl-36.aProtein CBR-RPL-41; Belongs to the eukaryotic ribosomal protein eL42 family. (126 aa)
rpl-15Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
rps-740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
rps-18Protein CBR-RPS-18; Belongs to the universal ribosomal protein uS13 family. (154 aa)
CBG21521Protein CBG21521. (151 aa)
eif-2alphaProtein CBG22041. (342 aa)
CBG22043Protein CBG22043; Belongs to the universal ribosomal protein uL15 family. (145 aa)
rla-1Protein CBR-RLA-1; Belongs to the eukaryotic ribosomal protein P1/P2 family. (111 aa)
rpl-2760S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
rpl-4Protein CBR-RPL-4. (345 aa)
pqn-24Protein CBR-PQN-24. (274 aa)
rpl-24.1Protein CBR-RPL-24.1. (159 aa)
rps-10Protein CBR-RPS-10. (149 aa)
rpl-32Protein CBR-RPL-32. (134 aa)
pab-1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (666 aa)
rpl-29Protein CBR-RPL-29. (31 aa)
CBG22485Protein CBG22485. (839 aa)
pqn-42Protein CBR-PQN-42. (546 aa)
rpl-30Protein CBR-RPL-30. (116 aa)
rla-060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (312 aa)
CBG02262Protein CBG02262. (124 aa)
rpl-7aProtein CBR-RPL-7A. (76 aa)
rpl-360S ribosomal protein L3; The L3 protein is a component of the large subunit of cytoplasmic ribosomes; Belongs to the universal ribosomal protein uL3 family. (401 aa)
rpl-560S ribosomal protein L5; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...] (294 aa)
eif-3.KEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (240 aa)
rps-2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (88 aa)
rpl-1860S ribosomal protein L18. (188 aa)
rpl-1260S ribosomal protein L12; Binds directly to 26S ribosomal RNA. (165 aa)
CBG25345Protein CBG25345. (135 aa)
CBG26383Protein CBG26383. (359 aa)
CBG25577Protein CBG25577. (81 aa)
cif-1COP9/Signalosome and eIF3 complex-shared subunit 1; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulat [...] (390 aa)
rpl-2060S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (180 aa)
rla-2Protein CBR-RLA-2; Belongs to the eukaryotic ribosomal protein P1/P2 family. (111 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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