STRINGSTRING
hop-1 hop-1 ubl-1 ubl-1 sos-1 sos-1 spe-4 spe-4 aph-1 aph-1 CBG22158 CBG22158 aph-2 aph-2 CBG19566 CBG19566 CBG19473 CBG19473 kxd-1 kxd-1 CBG17796 CBG17796 adm-4 adm-4 zak-1 zak-1 vav-1 vav-1 ubq-2 ubq-2 Cbr-tag-52 Cbr-tag-52 pen-2 pen-2 imp-1 imp-1 tiam-1 tiam-1 CBG12102 CBG12102 CBG12078 CBG12078 unc-73 unc-73 cyld-1 cyld-1 ubq-1 ubq-1 CBG08656 CBG08656 aex-3 aex-3 sel-12 sel-12 pix-1 pix-1 tap-1 tap-1 ikke-1 ikke-1 osg-1.1 osg-1.1 osg-1.2 osg-1.2 rhgf-1 rhgf-1 mom-4 mom-4 rack-1 rack-1 ect-2 ect-2 CBG02049 CBG02049 cgef-1 cgef-1 itsn-1 itsn-1 CBG24636 CBG24636 unc-51 unc-51 exc-5 exc-5 ephx-1 ephx-1 CBG23668 CBG23668 CBG23593 CBG23593
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hop-1Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (358 aa)
ubl-1Ubiquitin-like protein 1-40S ribosomal protein S27a; In the N-terminal section; belongs to the ubiquitin family. (163 aa)
sos-1Protein CBR-SOS-1. (339 aa)
spe-4Protein CBR-SPE-4. (483 aa)
aph-1Protein CBR-APH-1. (330 aa)
CBG22158Protein CBG22158. (482 aa)
aph-2Protein CBR-APH-2. (721 aa)
CBG19566Protein CBG19566. (337 aa)
CBG19473Protein CBG19473. (96 aa)
kxd-1Protein CBG19105. (130 aa)
CBG17796Protein CBG17796. (53 aa)
adm-4Protein CBR-ADM-4. (701 aa)
zak-1Protein CBR-ZAK-1. (769 aa)
vav-1Protein CBR-VAV-1. (971 aa)
ubq-2Protein CBR-UBQ-2. (128 aa)
Cbr-tag-52Protein CBR-TAG-52. (631 aa)
pen-2Protein CBR-PEN-2. (101 aa)
imp-1Protein CBR-IMP-1. (618 aa)
tiam-1Protein CBR-CGEF-2. (610 aa)
CBG12102Protein CBG12102. (186 aa)
CBG12078Protein CBG12078. (812 aa)
unc-73Protein CBR-UNC-73. (1618 aa)
cyld-1Protein CBR-CYLD-1. (1175 aa)
ubq-1Protein CBR-UBQ-1. (770 aa)
CBG08656Protein CBG08656. (402 aa)
aex-3Protein CBR-AEX-3. (1500 aa)
sel-12Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (450 aa)
pix-1Protein CBR-PIX-1. (808 aa)
tap-1Protein CBR-TAP-1. (389 aa)
ikke-1Protein CBR-IKKE-1. (828 aa)
osg-1.1Protein CBG05214. (623 aa)
osg-1.2Protein CBG05206. (647 aa)
rhgf-1Protein CBR-RHGF-1. (1376 aa)
mom-4Mitogen-activated protein kinase kinase kinase mom-4; Part of the Wnt signaling pathway essential for the specification of the mesodermal cell fate in early embryos. Stimulates the wrm-1/lit-1-dependent phosphorylation of pop-1 and plays a role in the initial nuclear accumulation of wrm-1 (By similarity). (545 aa)
rack-1Protein CBR-RACK-1. (325 aa)
ect-2Protein CBR-ECT-2. (958 aa)
CBG02049Protein CBG02049. (378 aa)
cgef-1Protein CBR-CGEF-1. (650 aa)
itsn-1Protein CBR-ITSN-1. (1099 aa)
CBG24636Protein CBG24636. (770 aa)
unc-51Protein CBR-UNC-51. (875 aa)
exc-5Protein CBR-EXC-5. (859 aa)
ephx-1Protein CBR-TAG-218. (1258 aa)
CBG23668Protein CBG23668. (439 aa)
CBG23593Protein CBG23593. (439 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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