STRINGSTRING
sem-5 sem-5 CBG02328 CBG02328 mpk-2 mpk-2 let-60 let-60 CBG25344 CBG25344 CBG23363 CBG23363 mpk-1 mpk-1 rskn-1 rskn-1 ral-1 ral-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sem-5Protein CBR-SEM-5. (229 aa)
CBG02328Protein CBG02328. (438 aa)
mpk-2Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (573 aa)
let-60Protein CBR-LET-60. (184 aa)
CBG25344Protein CBG25344. (78 aa)
CBG23363Protein CBG23363. (206 aa)
mpk-1Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (374 aa)
rskn-1Ribosomal protein S6 kinase. (803 aa)
ral-1Protein CBR-RAL-1. (213 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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