STRINGSTRING
CBG23394 CBG23394 got-2.1 got-2.1 CBG17305 CBG17305 Cbr-got-1.3 Cbr-got-1.3 got-1.2 got-1.2 asns-2 asns-2 got-2.2 got-2.2 asns-1 asns-1 CBG00524 CBG00524 CBG24187 CBG24187 gcp-2.1 gcp-2.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG23394Protein CBG23394. (717 aa)
got-2.1Aspartate aminotransferase. (419 aa)
CBG17305Protein CBG17305. (831 aa)
Cbr-got-1.3Protein CBR-GOT-1.3. (397 aa)
got-1.2Aspartate aminotransferase. (408 aa)
asns-2Protein CBR-ASNS-2. (567 aa)
got-2.2Aspartate aminotransferase. (414 aa)
asns-1Protein CBR-ASNS-1. (572 aa)
CBG00524Protein CBG00524. (764 aa)
CBG24187Protein CBG24187; Belongs to the mitochondrial carrier (TC 2.A.29) family. (690 aa)
gcp-2.1Glutamate carboxypeptidase 2 homolog. (770 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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