STRINGSTRING
CBG03616 CBG03616 mom-4 mom-4 tap-1 tap-1 ubq-1 ubq-1 CBG12102 CBG12102 ubq-2 ubq-2 zak-1 zak-1 CBG17796 CBG17796 ubl-1 ubl-1 kxd-1 kxd-1 CBG03606 CBG03606 CBG03609 CBG03609 tir-1 tir-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBG03616Protein CBG03616. (379 aa)
mom-4Mitogen-activated protein kinase kinase kinase mom-4; Part of the Wnt signaling pathway essential for the specification of the mesodermal cell fate in early embryos. Stimulates the wrm-1/lit-1-dependent phosphorylation of pop-1 and plays a role in the initial nuclear accumulation of wrm-1 (By similarity). (545 aa)
tap-1Protein CBR-TAP-1. (389 aa)
ubq-1Protein CBR-UBQ-1. (770 aa)
CBG12102Protein CBG12102. (186 aa)
ubq-2Protein CBR-UBQ-2. (128 aa)
zak-1Protein CBR-ZAK-1. (769 aa)
CBG17796Protein CBG17796. (53 aa)
ubl-1Ubiquitin-like protein 1-40S ribosomal protein S27a; In the N-terminal section; belongs to the ubiquitin family. (163 aa)
kxd-1Protein CBG19105. (130 aa)
CBG03606Protein CBG03606. (414 aa)
CBG03609Protein CBG03609. (174 aa)
tir-1Protein CBR-TIR-1. (585 aa)
Your Current Organism:
Caenorhabditis briggsae
NCBI taxonomy Id: 6238
Other names: C. briggsae, Caenorhabditis briggsae AF16
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